DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx4 and Stx2

DIOPT Version :10

Sequence 1:NP_525057.2 Gene:Syx4 / 31269 FlyBaseID:FBgn0024980 Length:333 Species:Drosophila melanogaster
Sequence 2:XP_063127147.1 Gene:Stx2 / 25130 RGDID:2558 Length:297 Species:Rattus norvegicus


Alignment Length:263 Identity:57/263 - (21%)
Similarity:133/263 - (50%) Gaps:28/263 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 DRSSSKMTQYGSN-----------VDDILNPYTEIRQQLAQIAANLETMNRMAQTVNLRTFN--- 121
            |.::.:.:..|.|           :|...:...|||..:|:||.::|.:.: ..::.|...|   
  Rat     7 DLTACRKSDDGDNAVIITVEKDHFMDAFFHQVEEIRSSIARIAQHVEDVKK-NHSIILSAPNPEG 70

  Fly   122 --ENEMDELHNKNLRLGNQLMTRFNDFKANLPAE---NDYSLEARMKRTLFYGLHQTFINLWHK- 180
              :.|:::|:.:..:..|::..:....:.:...:   |..|::.|::||....|.:.|:::..: 
  Rat    71 KIKEELEDLNKEIKKTANRIRGKLKAIEQSCDQDENGNRTSVDLRIRRTQHSVLSRKFVDVMTEY 135

  Fly   181 NE---LFLQNYETKVKKNLRLHTKIINSEASEQEIELLIENKTTKLFVDNFLQETEKERQTLREM 242
            ||   ||.:..:.::::.|    :|.....:::|:|.::|:....:|:.:.:.:::..||.|.|:
  Rat   136 NEAQILFRERSKGRIQRQL----EITGRTTTDEELEEMLESGKPSIFISDIISDSQITRQALNEI 196

  Fly   243 MDRFNELRRLEKSIEEVHALFMRIQTLVMEQSEVIQRVEFHAQQATLHVDKGADELDQAEQHQKK 307
            ..|..::.:||.||.|:|.:||.:...|..|.|::..:|.:...:..:|:...:|..:|.::|.|
  Rat   197 ESRHKDIMKLETSIRELHEMFMDMAMFVETQGEMVNNIERNVVNSVDYVEHAKEETKKAIKYQSK 261

  Fly   308 ARK 310
            ||:
  Rat   262 ARR 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx4NP_525057.2 COG5074 <187..313 CDD:227406 30/124 (24%)
SNARE_syntaxin1-like 238..298 CDD:277201 16/59 (27%)
Stx2XP_063127147.1 None

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