DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syx4 and syx-7

DIOPT Version :10

Sequence 1:NP_525057.2 Gene:Syx4 / 31269 FlyBaseID:FBgn0024980 Length:333 Species:Drosophila melanogaster
Sequence 2:NP_492422.2 Gene:syx-7 / 172718 WormBaseID:WBGene00009478 Length:248 Species:Caenorhabditis elegans


Alignment Length:251 Identity:58/251 - (23%)
Similarity:124/251 - (49%) Gaps:35/251 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 AQIAANLETMNRMAQTVNLRTFNENEMD---------ELHNKNLRLGNQLMTRFNDFKANL--PA 152
            :|:..|::.:|:  |.:.|.:|..|..|         ||.|:......:|....|.....|  .:
 Worm    13 SQLQLNIQNLNQ--QVIQLESFITNLSDSSESGQRERELFNRKAHNAQELSKETNALLKRLVVMS 75

  Fly   153 ENDYSLEARMKRTLFYGLHQTFINLWHKNELFLQNYETKVKKNLRLHTKIINSEASEQEIELLIE 217
            .:|.:|....:|     |...:|.:.::    ||..:.|..:     |:.....|:|.:.:...:
 Worm    76 NSDKNLRGVRER-----LQNEYIGVLNR----LQASQRKAAQ-----TEKAGMVAAEMDAQAARD 126

  Fly   218 NKTTKLFVDN-----FLQETEKERQTLREMMDRFNELRRLEKSIEEVHALFMRIQTLVMEQSEVI 277
            .....::.:|     .:|.|.:::..|::|.:|.|.|::||:.|.:|:|:|..:..:|.||.:::
 Worm   127 AAEYDMYGNNGRSGGQMQMTAQQQGNLQDMKERQNALQQLERDIGDVNAIFAELANIVHEQGDMV 191

  Fly   278 QRVEFHAQQATLHVDKGADELDQAEQHQKKARKKKIMLIVILAAVLLVLLLVGIYL 333
            ..:|.:.:.|.::|::||..:.||..:.:|||:||::|   |...::::.::|:.|
 Worm   192 DSIEANVEHAQIYVEQGAQNVQQAVYYNQKARQKKLLL---LCFFVILIFIIGLTL 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx4NP_525057.2 COG5074 <187..313 CDD:227406 32/130 (25%)
SNARE_syntaxin1-like 238..298 CDD:277201 19/59 (32%)
syx-7NP_492422.2 SynN 3..111 CDD:214699 23/113 (20%)
SNARE_syntaxin7_like 156..215 CDD:277200 18/58 (31%)

Return to query results.
Submit another query.