DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx4 and stx11b.2

DIOPT Version :10

Sequence 1:NP_525057.2 Gene:Syx4 / 31269 FlyBaseID:FBgn0024980 Length:333 Species:Drosophila melanogaster
Sequence 2:NP_001099072.1 Gene:stx11b.2 / 100005065 ZFINID:ZDB-GENE-050417-148 Length:288 Species:Danio rerio


Alignment Length:331 Identity:63/331 - (19%)
Similarity:140/331 - (42%) Gaps:69/331 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KDRLPELLQRSLSTNSSNSSSNGSLLLNVYSGTTEFIIGNTGGNNNSYSVVSQNSHS--CSNNNS 65
            :|||..|.:.|:        |||::                        ...:.:||  .|.|..
Zfish     2 RDRLGHLQEVSM--------SNGTV------------------------AEHETAHSLPASENTD 34

  Fly    66 STE-PKDRSSSKMTQYGSNVDDILNPYTEIRQQLAQI-----------------AANLETMNRMA 112
            ..: |:|.|::      .:::.:.:...|.|:|:..|                 :|:..|.:|.|
Zfish    35 LYDLPQDSSTN------PDMEAVFDEAQEARRQIHYIRLEVKRLREQNSHFFGSSASNTTSDRNA 93

  Fly   113 QTVNLRTFNENEMDELHNKNLRLGNQLMTRFNDFKANLPAENDYSLEARMKRTLFYGLHQTFINL 177
            ...:::|..:..:..|.|.:.. |.:|.:::.   .|.|.       ||:.:|.:..:..:|.:.
Zfish    94 IAADIKTRGQEMLTHLRNMDSH-GKELESKYG---VNSPV-------ARIAQTQYSSISNSFRDA 147

  Fly   178 WHKNELFLQNYETKVKKNLRLHTKIINSEASEQEIELLIENKTTKLFVDNFLQETEKERQTLREM 242
            ..:......:::...|..::...:|:..:.:..:||.::|:....:|.:|.:.|.:..|..|.::
Zfish   148 MVEYNDAEMSHKESCKAYIQRQMEIVGRDVTGDQIEEMLESGQWNVFSENMVSEGKTARSALIQI 212

  Fly   243 MDRFNELRRLEKSIEEVHALFMRIQTLVMEQSEVIQRVEFHAQQATLHVDKGADELDQAEQHQKK 307
            ..|..|:.:||:.|:.:|.:|:.:..||.|||.:...::.:.|.....|.:...:|::|::|.:.
Zfish   213 ESRHTEMVQLERRIKSLHEVFLDVAMLVEEQSSMTDYIQTNVQSTEAEVRQVLVKLERAKRHDRN 277

  Fly   308 ARKKKI 313
            ...||:
Zfish   278 NPFKKM 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx4NP_525057.2 COG5074 <187..313 CDD:227406 28/125 (22%)
SNARE_syntaxin1-like 238..298 CDD:277201 15/59 (25%)
stx11b.2NP_001099072.1 Syntaxin 50..243 CDD:459942 38/203 (19%)
SNARE 212..278 CDD:473982 17/65 (26%)

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