Protein Alignment fs(1)Yb and SoYb

DIOPT Version :10

• Sequence 1: NP_477494.2
• Gene: fs(1)Yb / 31262
• FlyBaseID: FBgn0000928
• Length: 1042
• Species: Drosophila melanogaster
• Sequence 2: NP_609335.3
• Gene: SoYb / 34331
• FlyBaseID: FBgn0051755
• Length: 1476
• Species: Drosophila melanogaster
• Alignment Length: 1180
• Identity: 271/1180 - (22%)
• Similarity: 448/1180 - (37%)
• Gaps: 312/1180 - (26%)

  Fly    23 YASPKSGAASLDFLAHTLRKREANTEKTILICQQNFE-----------AERLKFELAE-RDVNTI 75
            ::.||        |...:.:|..|.|..:.|....|.           .:.|...|.: ::....
  Fly    72 WSPPK--------LVRGVVRRRQNEEYLVWILDYGFNLCCSVWDLWPLPDHLSRSLCDFKEGGVA 128

  Fly    76 LLPPHGAMVGQVLLLWSKGYINQALILCDGMLEHLGVVEAN----LVIHTTLPELN----KF--- 129
            |:.||...|      ||:..|..    .|..||     :||    .|:|......|    ||
  Fly   129 LIAPHSGSV------WSRSAIES----LDKQLE-----DANQLTFQVVHRGKSNRNFGLLKFRSS 178

  Fly   130 ---EERLKWL-------------------SISARNAE--------------MLVITPCDEENEKE 158
               |:...:|                   .||...||              :|.:.....||.||
  Fly   179 CQTEDAANFLIKQDQGRCKETLTMAIPYEDISFEKAEINDMAIDTRPRLRRILELVVLLSENAKE 243

  Fly   159 GKGETEPEIVQQRMPLKVDAL----------NSMQLYEIKENTPPTSSEDYKAEADVLLSAATP- 212
              ....|..:||:   |:|||          ||::|....::...:|.:...|.....:|...|
  Fly   244 --STPTPSAIQQK---KLDALLQSHETYLIPNSVKLLSKVQSISESSMQTALANRSKQISKELPH 303

  Fly   213 -ATIPNDNKEQEI------NLSVEDATVKLLASFELGSTDSAAVDESSP-----AAAKFNAPV-- 263
             |....||:::|:      |||...:.|| |:|::..:|||:.:  |.|     ::...|:.|
  Fly   304 KANQSEDNRKKEVKYLESENLSECLSKVK-LSSYQQKNTDSSTL--SGPRNLASSSTNSNSNVRK 365

  Fly   264 ---------------YSPFVTENPTKSLDAEFQELVKSF-KVQNVFKNMNLPPPPSVSIEE---P 309
                           .|..:|||.|.  .:..:.:|.|. |::.:|.:|....|...|:::   .
  Fly   366 SMTLFKSSGAHLTTSLSVPLTENCTN--QSNNRTVVFSMDKMEQIFNDMLGKNPSERSVQKNRSQ 428

  Fly   310 VSSASASDYRHQIDTTSLDSIRTVKDSPASLAVVPFSAGGITYNNYGVLGWSRHAVVPCYGLTEA 374
            :.:::.|..:..::...:.....:.|...|:.:           .:.||..|...|.|.....|.
  Fly   429 MPNSNVSTTKRCVEKMHVCRSENMGDRKPSVCL-----------KHLVLAHSPEPVNPVTSYKEL 482

  Fly   375 PDISTIIRRAMQQMGVARSRARAVQRFAWPHVSLGKSVLVVGNLQIGKTWSYLPTVCQ---RSHE 436
            |..:||: .||..:..  ......|.:||||:....|:::|.....|::|||||.:|.   .|.|
  Fly   483 PLGNTIL-NAMDDLNF--QTPLPTQIYAWPHLVNRGSLVLVNPSGTGRSWSYLPVICSSVLSSFE 544

  Fly   437 DLQRRPD--VGRGPTCIFVCPNQGQGKQIERWMSTLLCLLGSASGFEDVVTHWDKTQLVDIVRRL 499
            ::....|  :..||..|.:..:....|::......|:... :....:.|.||  ...::|:...|
  Fly   545 NVTSNLDTRIAPGPLAILIVDSVENAKKLASHCEFLMKDF-NTQNLKVVNTH--AHSMMDVYMML 606

  Fly   500 KKPVGILLTSVDLLLQLLNH-----NPVG---SIFDAQAVKCIALDNLNDMVRVLPNDTMKLLQR 556
            ....|:|:|::..|..:|::     ||..   .|||....|  .|||               .:.
  Fly   607 LNSCGVLVTTLAHLNNILSNELPLVNPTRLEFIIFDDYDRK--RLDN---------------AEL 654

  Fly   557 LPEMFQLTQN----KCQLLVSGRIWHTDLMVQHILPLMPDVLVLFDDALEASVYGGVQLDVRVVA 617
            |.|:||...:    ..||::..:.||:: ..|.:|......|:||.|.|||::|||::.:| .:.
  Fly   655 LKEVFQKVNSIGGLSKQLVLVAQQWHSE-RFQKLLNRTTKPLILFGDFLEAALYGGLKFNV-TLR 717

  Fly   618 DEPEKIEHLKALIAERRNFANEPAVMVCSNSTEVLLLRRSLQAIGVNAHI-CVSEACYSNVAEWL 681
            ....|...|..::|| ::.:.:..::.|.|..|:    ..|.||.:.|.: ||      ::::..
  Fly   718 SSALKARQLLDILAE-QDGSKKRTLIYCKNQMEL----EELSAILIEAGLQCV------DISKAQ 771

  Fly   682 RQSPSGLLLVTDDVV-PRLKCGKIPLLIHYSFASMWARFKNRFSLFYANLKSPTTRPV--GQSVV 743
            .|||:.|:||.|..| .:|....|.||||:|....|.||..||.....|:::..|:|:  ||.::
  Fly   772 NQSPNRLMLVDDSQVRKQLPVRNIQLLIHFSLPESWLRFSRRFHTMADNIRNLFTKPIGRGQDLI 836

  Fly   744 FAKPTDLENI--W-KLCDFYMKHKLPRPGHLLGILSQRRLE-EQPTSRSL--CHQMAAFGDCLRH 802
            .....|..|.  | ::..|...|         |:.:|...: ||....:|  |....:.|:|.|:
  Fly   837 TYILMDENNAKEWPRIMKFLQDH---------GLTTQSMPDSEQQLDNTLPYCPYKLSNGNCNRN 892

  Fly   803 KCMYRHVMWRDEVLPPDHYPKNG--------LIRFLVLVCYSPAALAVR------------LSDQ 847
            :|..||...:.::      ||.|        |||...|..|.||.:||.            :...
  Fly   893 QCNKRHHFLKTDL------PKIGNPLLQPGTLIRCKFLKAYDPAHMAVMPMKYKSKDSTIWIDVP 951

  Fly   848 FPTAIRFLNFPMSDLGERVQRHYELEANRHMHPNPVP-GEMAVVKNINRYERVHIVSVESNVMVL 911
            :|:....|.|.||           ....|.:| ||.. .::..|::.....||.||...:...|.
  Fly   952 YPSYPSTLVFKMS-----------FGVPRKVH-NPCKINDVCFVQHKELLSRVRIVDNPARPQVT 1004

  Fly   912 VQLLDTSTECFSYKTSQLYSCDKIFKDSPREAMDLRILGLQPESLDRIWPDDARNLVRKDFFRRT 976
            |||:|..||....|.|||..|.:.|:|..:.|||:|:.||.......:|..|:
  Fly  1005 VQLMDYGTELLQVKASQLLECPEQFRDLQQLAMDIRLSGLAGSGQGGMWSTDS------------ 1057

  Fly   977 HNKRNRQFHAVVQSAIHRTIFVRNIYDDEGNDLLSFVINRFRSHQDECCQLKLDAMVMS------ 1035
                                             :.:|.:||....:|..|:.:|..|:.
  Fly  1058 ---------------------------------IQWVQDRFADINEEIMQITVDFGVLDVAYVKE 1089

  Fly  1036 ---SKDCPYM 1042
               .::||.|
  Fly  1090 IALIEECPTM 1099

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
fs(1)Yb	NP_477494.2	Tudor_SF	<862..960	CDD:470623	29/98 (30%)
SoYb	NP_609335.3	TUDOR	15..115	CDD:425754	8/50 (16%)
		DEAD-like_helicase_N	488..>646	CDD:475120	40/163 (25%)
		TUDOR	930..1043	CDD:425754	35/124 (28%)