DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL14 and HLL

DIOPT Version :10

Sequence 1:NP_525048.1 Gene:mRpL14 / 31222 FlyBaseID:FBgn0040389 Length:161 Species:Drosophila melanogaster
Sequence 2:NP_173200.1 Gene:HLL / 838332 AraportID:AT1G17560 Length:196 Species:Arabidopsis thaliana


Alignment Length:161 Identity:41/161 - (25%)
Similarity:69/161 - (42%) Gaps:62/161 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 LRVVDNSDLGKKAMAEGRPPRCIH-VYNKRGVGFIGDKVLVAI-----------------KGQMK 90
            |:.|||| ..|:.|       ||. :..|:|.. :||.::.::                 ||::|
plant    55 LKCVDNS-CAKEVM-------CIQSLRGKKGAR-LGDIIVGSVKEANPIVQKKVKKDAIPKGKVK 110

  Fly    91 KGILV-GL-------KQNQKPKQPKFDSNNLVLI---------DDNGS--------PLGTRIHVP 130
            ||::| |:       |......|.|||.|.:|::         :.:||        |.|||:..|
plant   111 KGMVVYGVVVRAAMPKGRADGSQVKFDDNAIVVVGIKEKKGQNNSHGSKRKMEYNQPTGTRVFGP 175

  Fly   131 IPTILRTILKEKTLAKGADYTKVLAIASRYV 161
            :|..:|  |:::        .|:|::|...|
plant   176 VPHEMR--LRKQ--------LKILSLAQHIV 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL14NP_525048.1 Ribosomal_uL14 39..136 CDD:466774 35/134 (26%)
HLLNP_173200.1 Ribosomal_L14 50..195 CDD:425547 40/158 (25%)

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