DRSC/TRiP Functional Genomics Resources

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Protein Alignment: mRpL14 and HLL

Sequence 1:NP_001259186.1 Gene:mRpL14 FlyBaseID:FBgn0040389 Length:161 Species:Drosophila melanogaster
Sequence 2:NP_173200.1 Gene:HLL AraportID:AT1G17560 Length:196 Species:Arabidopsis thaliana

Alignment Length:161 Identity:41/162 (25%)
Similarity:69/162 (43%) Gaps:62/162 (38%)


  Fly    44 LRVVDNSDLGKKAMAEGRPPRCIH-VYNKRGVGFIGDKVLVAI-----------------KGQMK 90
            |:.|||| ..|:.|       ||. :..|:|.. :||.::.::                 ||::|
plant    55 LKCVDNS-CAKEVM-------CIQSLRGKKGAR-LGDIIVGSVKEANPIVQKKVKKDAIPKGKVK 110

  Fly    91 KGILV-GL-------KQNQKPKQPKFDSNNLVLI---------DDNGS--------PLGTRIHVP 130
            ||::| |:       |......|.|||.|.:|::         :.:||        |.|||:..|
plant   111 KGMVVYGVVVRAAMPKGRADGSQVKFDDNAIVVVGIKEKKGQNNSHGSKRKMEYNQPTGTRVFGP 175

  Fly   131 IPTILRTILKEKTLAKGADYTKVLAIASRYV 161
            :|..:|  |:::        .|:|::|...|
plant   176 VPHEMR--LRKQ--------LKILSLAQHIV 196

Known Domains:


GeneSequenceDomainRegion External IDIdentity
mRpL14NP_001259186.1 Ribosomal_L14 38..159 CDD:294234 40/158 (25%)
HLLNP_173200.1 Ribosomal_L14 49..195 CDD:278659 40/159 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 D1547267at2759
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
11.010

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