DRSC/TRiP Functional Genomics Resources

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Protein Alignment: mRpL14 and AT5G46160

Sequence 1:NP_001259186.1 Gene:mRpL14 FlyBaseID:FBgn0040389 Length:161 Species:Drosophila melanogaster
Sequence 2:NP_851140.1 Gene:AT5G46160 AraportID:AT5G46160 Length:173 Species:Arabidopsis thaliana

Alignment Length:134 Identity:41/135 (30%)
Similarity:64/135 (47%) Gaps:38/135 (28%)


  Fly    44 LRVVDNSDLGKKAMAEGRPPRCIHVYNKRGVGFIGDKVLVAIK-----GQMKKGILV-GL----- 97
            |:|||||. .||.|       ||.....:....:||.::.::|     |::|||.:| |:     
plant    54 LKVVDNSG-AKKVM-------CIQALKGKKGARLGDTIVASVKEAMPNGKVKKGAVVYGVVVRAA 110

  Fly    98 --KQNQKPKQPKFDSNNLVLIDD-------NGSPLGTRIHVPIPTILRTILKEKTLAKGADYTKV 153
              :......:.:||.|.:||:|.       :..|:|||:..|:|..||   |:|.|       |:
plant   111 MQRGRVDGSEVRFDDNAVVLVDSKDKNTKTDRQPIGTRVFGPVPHELR---KKKHL-------KI 165

  Fly   154 LAIA 157
            ||:|
plant   166 LALA 169

Known Domains:


GeneSequenceDomainRegion External IDIdentity
mRpL14NP_001259186.1 Ribosomal_L14 38..159 CDD:294234 41/135 (30%)
AT5G46160NP_851140.1 Ribosomal_L14 48..172 CDD:278659 41/135 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 D1547267at2759
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 0.667 Consistency score
21.920

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