DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vinc and alpha-Cat

DIOPT Version :10

Sequence 1:NP_476820.1 Gene:Vinc / 31201 FlyBaseID:FBgn0004397 Length:961 Species:Drosophila melanogaster
Sequence 2:NP_524219.1 Gene:alpha-Cat / 40517 FlyBaseID:FBgn0010215 Length:917 Species:Drosophila melanogaster


Alignment Length:991 Identity:217/991 - (21%)
Similarity:387/991 - (39%) Gaps:184/991 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 TKTIESILDPVAQQVSRLVILH--EEAEDGNAMPDLSRPVQVVSAAVANLVKVGRDTINSSDDKI 68
            |.::|..|:|:..||:.||...  .:.:.|.: ...|..|..|..|..|.::.|......:.|  
  Fly    29 TMSVEKTLEPLVLQVTTLVNTKGPSKKKKGKS-KRASALVAAVEKATENFIQKGEQIAYENPD-- 90

  Fly    69 LRQDMPSALHRVEGASQLLEEASDMLRSDPYSGPARKKLIEGSRGILQGTSSLLLCFDESEVRKI 133
            :.|:|.:|:..|:.....:..|:.....||.|...|..::..:|.:|...:.||:..|..:|..:
  Fly    91 ITQEMLTAVDEVKKTGDAMSIAAREFSEDPCSSLKRGNMVRAARNLLSAVTRLLILADMVDVHLL 155

  Fly   134 IQECKRVLDYLAVAEVINTMEQLVQFLKDLSPCLSKVHREVGAREKELTHQVHSEILVRCLEQVK 198
            ::....|.|.|...:..::.::|:..::.......::.::...|::||......:.|......:|
  Fly   156 LKSLHIVEDDLNKLKNASSQDELMDNMRQFGRNAGELIKQAAKRQQELKDPQLRDDLAAARAMLK 220

  Fly   199 TLAPILICSMKVYIHIVEQQGRGAEEAAENRNYLAARMSDELQEIIRVLQLTTYDEDTSELDNLT 263
            ..:.:|:.:.|||:...|     .:.|..||::                                
  Fly   221 KHSTMLLTASKVYVRHPE-----LDLAKVNRDF-------------------------------- 248

  Fly   264 VLKKLSNAISNKMEQANEWLSNPYALRGGVGEKALRQ-------VIDNATEISERCLPQDSYPIR 321
            :||::.:|::...:.|....|.|..:..|.||.|...       |:|..|...:|.        |
  Fly   249 ILKQVCDAVNTISDVAQGKSSQPTDIYSGAGELAAALDDFDEGIVMDPMTYSEKRS--------R 305

  Fly   322 KLADEVTAMANTLCELRQEGKGQSPQAESLVRGIRDRMGELKSLVHQAVLGVDKAGVQQTAHTIQ 386
            :|.:|                                  .|:|::..|.|..|.           
  Fly   306 QLLEE----------------------------------RLESIISAAALMADA----------- 325

  Fly   387 GRLEQAVKWLQHPEINDGGLGERAINLIVEEGRKVAEGCPGHQKAEIQQLCDEVERLKRQAAGSG 451
                            |....||...::.|        |...::| :|.|..|......|...| 
  Fly   326 ----------------DCTRDERRERIVAE--------CNAVRQA-LQDLLSEYMSNMSQKDNS- 364

  Fly   452 PAAKQAAKQLTQKLYELKAAIQNALVNRIVQDFMDVSTPLKQFTEAVLQPEGTPGREQNFNQKSN 516
            |...:|..|:.:|..:|:..::.|:|:.:...|::.:|||....||     ...|.|:...:||.
  Fly   365 PGLSRAIDQMCRKTRDLRRQLRKAVVDHVSDSFLETTTPLLDLIEA-----AKSGNEKKVREKSE 424

  Fly   517 NLQAFSDRASKTSRMVAAGGACGNKKIAEILLSSAAQVDSLTPQLISAGRIRMNYPGSKAADEHL 581
            .....:::..:.:.:|.:  ...|:...:::..:|||::||.||:|:|..|....|.||.|.|::
  Fly   425 IFTKHAEKLVEVANLVCS--MSNNEDGVKMVRYAAAQIESLCPQVINAASILTVRPNSKVAQENM 487

  Fly   582 QNLKQQYADTVLRMRTLCDQATDPADFIKTSEEHMQVYAKLCEDAIHARQPQKMVDNTSNIARLI 646
            ...:|.:...|..:....|..|...||:..||.|:......|..|:.....:.:......|....
  Fly   488 TTYRQAWEVQVRILTEAVDDITTIDDFLAVSENHILEDVNKCVMALQVGDARDLRATAGAIQGRS 552

  Fly   647 NRVLLVAKQEADNSEDPVFTERLNAAAN--------RLERSLPAMVGDAKLVATNIADPAAAAAW 703
            :||..|.:.|.||.|..::|:|:..|..        :.::.:.|.||.....:....|       
  Fly   553 SRVCNVVEAEMDNYEPCIYTKRVLEAVKVLRDQVMMKFDQRVGAAVGALSNNSNKDVD------- 610

  Fly   704 KNSF---QRLLGD-VREVRDAIAPPQ-PPPLPTSLP-PPIPEL-------SALHLSNQNAERAPP 755
            :|.|   .||:.| |||:|.|:...: ...|.|... .|:.:|       |:.|..:|..:..| 
  Fly   611 ENDFIDASRLVYDGVREIRRAVLMNRSSEDLDTDTEFEPVEDLTLETRSRSSAHTGDQTVDEYP- 674

  Fly   756 RPPLPREGLAPVRPPPPETDDEDEGVFRTMPHANQPILIAARGL--HQEVRQWSSKDNEIIAAAK 818
                ...|:...|....:..:||:     ...|.|..|.....|  ..||.:|....|:||..||
  Fly   675 ----DISGICTAREAMRKMTEEDK-----QKIAQQVELFRREKLTFDSEVAKWDDTGNDIIFLAK 730

  Fly   819 RMAILMARLSELVLSDSRG---SKRELIATAKKIAEASEDVTRLAKELARQCTDRRIRTNLLQVC 880
            .|.::|..:::  .:..||   :..::|..||||:||...:.:|.:|:|.||.:...:.:||...
  Fly   731 HMCMIMMEMTD--FTRGRGPLKTTMDVINAAKKISEAGTKLDKLTREIAEQCPESSTKKDLLAYL 793

  Fly   881 ERIPTIGTQLKILSTVKATMLGAQGS--DEDREATEMLVGNAQNLMQSVKETVRAAEGASIKIRS 943
            :||.....|::|.|.|||.:....|.  ....::...|:..|:|||.:|..||:.:..||.|...
  Fly   794 QRIALYCHQIQITSKVKADVQNISGELIVSGLDSATSLIQAAKNLMNAVVLTVKYSYVASTKYTR 858

  Fly   944 DQT--SNRLQWVRRQP 957
            ..|  |..:.|..:.|
  Fly   859 QGTVSSPIVVWKMKAP 874

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VincNP_476820.1 Vinculin 3..960 CDD:460040 217/991 (22%)
alpha-CatNP_524219.1 Vinculin 26..877 CDD:460040 217/991 (22%)

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