DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vinc and ctnna1

DIOPT Version :10

Sequence 1:NP_476820.1 Gene:Vinc / 31201 FlyBaseID:FBgn0004397 Length:961 Species:Drosophila melanogaster
Sequence 2:NP_571531.1 Gene:ctnna1 / 30741 ZFINID:ZDB-GENE-991207-24 Length:907 Species:Danio rerio


Alignment Length:1009 Identity:217/1009 - (21%)
Similarity:388/1009 - (38%) Gaps:223/1009 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 TKTIESILDPVAQQVSRLVILHEEAEDG--NAMPDLSRPVQVVSAAV----ANLVKVGRDTINSS 64
            |..:|.:|:|:..||:.||   ..:..|  |.....|:...|::|:|    .|.::.|...  :.
Zfish    22 TLAVERLLEPLVTQVTTLV---NSSNKGPSNKKKGRSKKAHVLAASVDEATQNFLEKGEKI--AK 81

  Fly    65 DDKILRQDMPSALHRVEGASQLLEEASDMLRSDPYSGPARKKLIEGSRGILQGTSSLLLCFDESE 129
            :.:.|::::.:|:..|....:.::.||.....||.|...|..::..:|.:|...:.||:..|.::
Zfish    82 ESQFLKEELTAAVEDVRKQGESMKMASGEFAEDPCSSVKRGNMVRAARALLSAVTHLLVLADMAD 146

  Fly   130 VRKIIQECKRVLDYLAVAEVINTMEQL-VQFLKDLSPCLSKVHREVGAREKELTHQVHSEILVRC 193
            |.:::.:.|.|.:.|.......|.:.| :|: |.|.|.:.|::.....|::||....|.:.:...
Zfish   147 VYQLLLQLKLVEENLMKVRNAGTEQDLGIQY-KALKPEVDKLNMMAAKRQQELKDVHHKDQMAAA 210

  Fly   194 LEQVKTLAPILICSMKVYIHIVEQQGRGAEEAAENRNYLAARMSDELQEIIRVLQLTTYDEDTSE 258
            ...::...|:|                          |.|:|..           |...|....:
Zfish   211 RGVLQRNVPML--------------------------YTASRAC-----------LQHPDVAAYK 238

  Fly   259 LDNLTVLKKLSNAIS--NKMEQANEWLSNPYALRGGVGEKAL------RQVIDNATEIS-ERCLP 314
            .:...:.|:|.:|:|  :...||.....:.::...|.||.|.      :|:|.:....| ||..|
Zfish   239 ANRDLIYKQLQHAVSGISNAAQATSSEDSSFSQTAGGGELAYALNNFDKQIIVDPLSFSEERFRP 303

  Fly   315 QDSYPIRKLADEVTAMANTLCELRQEGKGQSPQAESLVRGIRDRMGELKSLVHQAVLGVDKAGVQ 379
            .....:..:......||::.|......:....:..|:.:.::|.:.|...               
Zfish   304 SLEERLESIISGAALMADSSCTRDDRRERIVAECNSVRQALQDLLSEYMG--------------- 353

  Fly   380 QTAHTIQGRLEQAVKWLQHPEINDGGLGERAINLIVEEGRKVAEGCPGHQKAEIQQLCDEVERLK 444
                                                ..|||        :|::            
Zfish   354 ------------------------------------NAGRK--------EKSD------------ 362

  Fly   445 RQAAGSGPAAKQAAKQLTQKLYELKAAIQNALVNRIVQDFMDVSTPLKQFTEAVLQPEGTPGREQ 509
                    |...|..::|:|..:|:..::.|:::.:...|::.:.||....||.          :
Zfish   363 --------ALNTAIDRMTKKTRDLRRQLRKAVMDHVSDSFLETNVPLLVLIEAA----------K 409

  Fly   510 NFNQK--SNNLQAFSDRASKTSRMVAAGGAC---GNKKIAEILLSSAAQVDSLTPQLISAGRIRM 569
            |.|:|  ....|.|.:.|:|.  :..|..||   .|::..:::..:|:|:::|.||:|:|.....
Zfish   410 NGNEKEVKEYAQVFREHANKL--IEVANLACSISNNEEGVKLVRMAASQLETLCPQVINAALALA 472

  Fly   570 NYPGSKAADEHLQNLKQQYADTVLRMRTLCDQATDPADFIKTSEEHMQVYAKLCEDAIHARQPQK 634
            ..|.||.|.:::...|.|:...|..:....|..|...||:..||.|:......|..|:.    :|
Zfish   473 AKPNSKVAQDNMDLFKDQWEKQVRVLTDAVDDITSIDDFLCVSENHILEDVNKCVIALQ----EK 533

  Fly   635 MVDNTSNIARLIN----RVLLVAKQEADNSEDPVFTERLNAAANRL-ERSLPAMVGDAKLVATNI 694
            .||.....|..|.    ||:.|...|.||....|:||::..|...| |..:|......:.....:
Zfish   534 DVDGLDRTAGAIRGRAARVVHVVTSEMDNYMPGVYTEKVLEATKLLTETVMPRFTEQVEAAVEAL 598

  Fly   695 ADPAAAAAWKNSF---QRLLGD-VREVRDAIAPPQPPP---------------LPTSLPPPIPEL 740
            :........:|.|   .||:.| ||::|.|:...:.|.               ..||:.....:|
Zfish   599 SANNGQPVDENEFIDASRLVYDGVRDIRKAVLMIRTPEELDDSDFETEDFDSRSRTSVQTEDDQL 663

  Fly   741 SALHLSNQNAERAPPRPPLPREGLAPVRPPPPETDDEDEGVFRTMPHANQPILIAARGLHQEVRQ 805
                ::.|:|.....:  ||:|..|.:........:|..                  .|..||.:
Zfish   664 ----IAGQSARAIMAQ--LPQEQKAKIAEQVASFQEEKS------------------KLDAEVSK 704

  Fly   806 WSSKDNEIIAAAKRMAILMARLSELVLSDSRG-----SKRELIATAKKIAEASEDVTRLAKELAR 865
            |....|:||..||:|.::|..:::.    :||     :..::|:.|||||||...:.:|.:.:|.
Zfish   705 WDDSGNDIIVLAKQMCMIMMEMTDF----TRGKGPLKNTSDVISAAKKIAEAGSRMDKLGRAIAD 765

  Fly   866 QCTDRRIRTNLLQVCERIPTIGTQLKILSTVKATM--LGAQGSDEDREATEMLVGNAQNLMQSVK 928
            ||.|...:.:||...:||.....||.|.|.|||.:  ||.:......::...|:..|:|||.||.
Zfish   766 QCPDSACKQDLLAYLQRIALFCHQLNICSKVKAEVQNLGGELVVSGLDSAMSLIQAAKNLMNSVV 830

  Fly   929 ETVRAAEGASIKIRSDQTSNRL-----QWVRRQP 957
            .||:|:..||.|.:..|....|     .|..:.|
Zfish   831 STVKASYVASTKYQKSQDMQSLNMPAISWKMKAP 864

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VincNP_476820.1 Vinculin 3..960 CDD:460040 217/1009 (22%)
ctnna1NP_571531.1 Vinculin 19..867 CDD:460040 217/1009 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 870..895
Blue background indicates that the domain is not in the aligned region.

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