DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vinc and Vcl

DIOPT Version :10

Sequence 1:NP_476820.1 Gene:Vinc / 31201 FlyBaseID:FBgn0004397 Length:961 Species:Drosophila melanogaster
Sequence 2:XP_006518985.1 Gene:Vcl / 22330 MGIID:98927 Length:1134 Species:Mus musculus


Alignment Length:1148 Identity:470/1148 - (40%)
Similarity:646/1148 - (56%) Gaps:202/1148 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPVFHTKTIESILDPVAQQVSRLVILHEEAE-DGNAMPDLSRPVQVVSAAVANLVKVGRDTINSS 64
            ||||||:||||||:|||||:|.|||:|||.| ||.|:|||:.||..|.|||:|||:||::|:.::
Mouse     1 MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKETVQTT 65

  Fly    65 DDKILRQDMPSALHRVEGASQLLEEASDMLRSDPYSGPARKKLIEGSRGILQGTSSLLLCFDESE 129
            :|:||::|||.|..:||.|...|.:|:.||:|||||.|||..||:||||||.|||.|||.|||:|
Mouse    66 EDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLLLTFDEAE 130

  Fly   130 VRKIIQECKRVLDYLAVAEVINTMEQLVQFLKDLSPCLSKVHREVGAREKELTHQVHSEILVRCL 194
            |||||:.||.:|:||.||||:.|||.||.:.|:|.|.::|:.:.:..|::|||||.|..:||..:
Mouse   131 VRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNSM 195

  Fly   195 EQVKTLAPILICSMKVYIHIVEQQGRGAEEAAENRNYLAARMSDELQEIIRVLQLTTYDEDTSEL 259
            ..||.|.|:||.:||:::.....:.:|.|||.:|||:...:||.|:.|||||||||::|||....
Mouse   196 NTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWAS 260

  Fly   260 DNLTVLKKLSNAISNKMEQANEWLSNPYALRGGVGEKALRQVIDNATEISERCL----------- 313
            .:...:|:...:|.:|:.||..||.:|.|..|..||:|:||::|.|.::.|.|.           
Mouse   261 KDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTC 325

  Fly   314 ----------------PQDSYPI------------------------------------------ 320
                            .|.:.|:                                          
Mouse   326 KMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDA 390

  Fly   321 -------------------------RKLAD----------------EVTAMANTLCELRQEGKGQ 344
                                     ||:|:                |:.|:.:.|.:||::|||.
Mouse   391 AQNWLADPNGGPEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGD 455

  Fly   345 SPQAESLVRGIRDRMGELKSLVHQAVLGVDKAGVQQTAHTIQGRLEQAVKWLQHPEINDGGLGER 409
            ||:|.:|.:.:...:..|::..::||.....|   :.|..::|::|||.:|:.:|.::|.|:|:.
Mouse   456 SPEARALAKQVATALQNLQTKTNRAVANSRPA---KAAVHLEGKIEQAQRWIDNPTVDDRGVGQA 517

  Fly   410 AINLIVEEGRKVAEGCPGHQKAEIQQLCDEVERLKRQAA-------GSGPAAKQAAKQLTQKLYE 467
            ||..:|.||.::|....|..:.::...||.|::|..|.|       |..|.|:..|.||...|.:
Mouse   518 AIRGLVAEGHRLANVMMGPYRQDLLAKCDRVDQLTAQLADLAARGEGESPQARALASQLQDSLKD 582

  Fly   468 LKAAIQNALVNRIVQDFMDVSTPLKQFTEAVLQPEGTPGREQNFNQKSNNLQAFSDRASKTSRMV 532
            |||.:|.|:...:...|.|.:||:|....|...|...|.||:.|::::.|.:..|.|...|:...
Mouse   583 LKAQMQEAMTQEVSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLGATAEKA 647

  Fly   533 AAGGACGNKKIAEILLSSAAQVDSLTPQLISAGRIRMNYPGSKAADEHLQNLKQQYADTVLRMRT 597
            ||.|. .||...|.:.:|......||||:|||.||.:..||::||.||.:.:|.|:.|.|.:|..
Mouse   648 AAVGT-ANKSTVEGIQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTG 711

  Fly   598 LCDQATDPADFIKTSEEHMQVYAKLCEDAIHARQPQKMVDNTSNIARLINRVLLVAKQEADNSED 662
            |.|:|.|....:..|||.::.....|:.|:...|||.:|...::|||..||:|||||:|.:||||
Mouse   712 LVDEAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSED 776

  Fly   663 PVFTERLNAAANRLERSLPAMVGDAKLVATNIADPAAAAAWKNSFQRLLGDVREVRDAIAPPQPP 727
            |.|.|.:.||::.|.:::..||.|||.||.||:||....::.:|..|:||.|.:||:|..|.:| 
Mouse   777 PKFREAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQEP- 840

  Fly   728 PLPTSLPPPIPELSALHLSNQNAERAPPRPPLPREGLAPVRPPPPETDDED-------------- 778
                ..|||.|:|..|.|::   |.|||:||||...:.|.||||||..||:              
Mouse   841 ----DFPPPPPDLEQLRLTD---ELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPM 898

  Fly   779 ---------------------------------------------------EGVFRTMPH---AN 789
                                                               |.....||.   .|
Mouse   899 MMAARQLHDEARKWSSKPGIPAAQVGIGVVAEANAADAVGFPFPSDMEDDYEPELLLMPSNQPVN 963

  Fly   790 QPILIAARGLHQEVRQWSSKDNEIIAAAKRMAILMARLSELVLSDSRGSKRELIATAKKIAEASE 854
            ||||.||:.||:|..:||||.|:|||||||||:|||.:|.||...| |:||.||..||.||:||:
Mouse   964 QPILAAAQSLHREATKWSSKGNDIIAAAKRMALLMAEMSRLVRGGS-GTKRALIQCAKDIAKASD 1027

  Fly   855 DVTRLAKELARQCTDRRIRTNLLQVCERIPTIGTQLKILSTVKATMLGAQG-SDEDRE-ATEMLV 917
            :|||||||:|:||||:||||||||||||||||.|||||||||||||||... |||:.| ||||||
Mouse  1028 EVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQATEMLV 1092

  Fly   918 GNAQNLMQSVKETVRAAEGASIKIRSDQTSNRLQWVRRQPWYQ 960
            .||||||||||||||.||.||||||:| ....|:|||:.||||
Mouse  1093 HNAQNLMQSVKETVREAEAASIKIRTD-AGFTLRWVRKTPWYQ 1134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VincNP_476820.1 Vinculin 3..960 CDD:460040 466/1144 (41%)
VclXP_006518985.1 Vinculin 3..1134 CDD:460040 466/1144 (41%)

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