DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ph-p and phc3

DIOPT Version :10

Sequence 1:NP_476871.2 Gene:ph-p / 31181 FlyBaseID:FBgn0004861 Length:1589 Species:Drosophila melanogaster
Sequence 2:NP_001430217.1 Gene:phc3 / 558094 ZFINID:ZDB-GENE-070912-369 Length:890 Species:Danio rerio


Alignment Length:1114 Identity:252/1114 - (22%)
Similarity:376/1114 - (33%) Gaps:339/1114 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   569 RNQPDGTQGMFIQQQPATQTLQTQQNQIIQCNVTQTPTKARTQLDALAPKQQQQQQQVGTTNQTQ 633
            |.:.:|..|:......||.|..| ...|...|::......:.....|...|....|.:......|
Zfish     9 REELEGDGGVTTASTTATSTTPT-GTSIPSGNISSDRQAVQVIQQTLHRPQSMTAQYLQQMYAAQ 72

  Fly   634 QQQLAVATAQLQQQ---QQQLTAAALQRPGAPVMPHNGTQVRPASSVSTQTA-QNQSLLKAKMRN 694
            ||.:.:.||.||||   ||.|||..:..........||.|...:.|.|...| |..::.:..:..
Zfish    73 QQHILLQTAALQQQQQHQQNLTATQILTTTDMAAQTNGRQFTSSPSSSNGNAPQLANVTQTSIPI 137

  Fly   695 KQQPVRPALATLKTEI-----GQVAGQNKVVGHLTTVQQQQQATNLQQVVNAAGNKMVVMSTTGT 754
            ...||...:|.::...     |.::.|..::|:.:....|.|.....|        |:::    |
Zfish   138 PTSPVTQPMARIQVTSSSSTGGDISQQAMLLGNSSPTGSQAQMYLRTQ--------MLIL----T 190

  Fly   755 PITLQNGQTLHAATAAGVDKQQQQLQLFQKQQILQQQQMLQQQIAAIQMQQQQAAVQAQQ-QQQQ 818
            |          |||.|.|     |..|.....|..|....|.|..|::.....|...:|. |.:.
Zfish   191 P----------AATVAAV-----QPDLTVVSSISSQSASSQVQSLALRTHLPGALTTSQNIQIKP 240

  Fly   819 QVSQQQQVNAQQQQAVAQQQQAVAQAQQQQREQQQQVAQAQAQHQQALANATQQIL---QVAPNQ 880
            .:..|..|:...:.::...:.  .|..|...|..:.|:        .|.|.||...   .:.|:.
Zfish   241 PLQGQTLVSPPPKMSICPLKS--TQLPQNLVETSRSVS--------VLNNVTQTPSAQPAIPPST 295

  Fly   881 F--ITSHQQQQQQQLHNQLIQQQLQQQAQAQVQAQVQAQAQQQQQQREQQQNIIQQIVVQQSGAT 943
            |  :.||          |||:.||...:..:|..                    |.:::|||.:|
Zfish   296 FTPVQSH----------QLIRHQLHCPSGPRVAP--------------------QHLIIQQSSST 330

  Fly   944 SQQTSQQQQHHQSGQLQL-------SSVPFSVSSSTTPAGIATSSALQAALSASGAIFQTAKPGT 1001
                     |.|...:.|       |..||::.:.|||......|.....||...:..|||..  
Zfish   331 ---------HRQLHPITLRVTAQDGSPTPFTLQTRTTPTTATVQSQQTELLSVPSSTNQTANQ-- 384

  Fly  1002 CSSSSPTSSVVTITNQSSTPLVTSSTVASIQQAQTQSAQVHQHQQLISATIAGGTQQQPQGPP-S 1065
                         |..:|.|.|.                                   |..|| .
Zfish   385 -------------TKYTSPPAVL-----------------------------------PDPPPLH 401

  Fly  1066 LTPTTNPILAMTSMMNATVGHLSTAPPVTV---------SVTSTAVTSSPGQLVLLSTASSGGGG 1121
            |.|...|:...|.        ||..||:.:         ||.:..|.|..   .|||..      
Zfish   402 LGPALEPVSQYTP--------LSCPPPLKLVQPQRLALRSVQAVEVQSDH---TLLSEE------ 449

  Fly  1122 SIPAT------PTKETPSKGPTATLVPIGSPKTPVSGKDTCTTPKSSTPATVSASVEASSSTGEA 1180
            .:|.|      |.:..|.....|..:.: .|.|...........:|.....|:.:..||......
Zfish   450 ELPLTEAVLQLPFQSLPPPQTVAVDLKV-QPATQTEASQVTPLLESVNLTLVTDAEHASPPQNSR 513

  Fly  1181 LSNGDASDRSSTPSKGATTPTSKQSNAAVQPPSSTTPNS---VSGKEEPKLATCGSLTSATSTST 1242
            .|:.....||..|.:.:...|.:..|..........|:|   :...|||        |.||| |.
Zfish   514 TSSSPTLSRSDEPQRSSDVVTDQPENLTADQEQPCVPSSRSVIRSPEEP--------THATS-SP 569

  Fly  1243 TTTITNGIGVARTTASTAVSTASTTTTSSGTFITSCTSTTTTTTSSISNGSKDLP-KAMIKPNVL 1306
            :..:::.:     .:|:.:|:||...:..|.                       | :|:.:|::|
Zfish   570 SPLLSSAV-----RSSSRLSSASLPESPEGR-----------------------PSQAISRPHIL 606

  Fly  1307 THVIDGFIIQEANEPFPVTRQRYA-------------------------------DKDVSDEPPK 1340
            ||:|:||:|:|..|||||   |:|                               |.|:.|...:
Zfish   607 THLIEGFVIREGLEPFPV---RHASLEMNLQATLPENREDGESALIDADHPDSSSDSDIDDPLAE 668

  Fly  1341 KKATMQEDIKLSGIASAPGSDMVACEQCGKME-HKAKLKRKRYCSPGCSRQ-------------- 1390
            .:.|::   ||        .:::.||.|||.. .:|.|:.||:||..|:|:              
Zfish   669 DEQTVE---KL--------PEVLECEFCGKRGLAQAFLRSKRFCSMTCARRFNLRCKKRLNRLRE 722

  Fly  1391 --------AKNGIGGVGSGETNGLGTGGIVGVDAMALVDRLDEAMAEEKMQTEATPKLSESFPIL 1447
                    ...|..|..|...||            :..:.|.....:...|......:|.|..:.
Zfish   723 EKVTYWPHRSMGKRGRPSRCLNG------------SAREHLPRPQLQGSHQASDNQMVSNSVWME 775

  Fly  1448 GASTEVPPMSLPVQAAISAPSPLAMPLGSPLSVALPTLA----------PLSVVTSGAAPKSSEV 1502
            ....|.||                    .|::..|...|          ..|.|.|.:   |||:
Zfish   776 REEEEDPP--------------------GPMTTRLRLQAEREKEQNREQEQSRVESSS---SSEL 817

  Fly  1503 NGTDRPPISSWSVDDVSNFIRELPGCQDYVDDFIQQEIDGQALLLLKEKHLVNAMGMKLGPALKI 1567
            .....|  |.|||:.|.:||..||||.|...:|..|||||||||||.|.||::||.:||||||||
Zfish   818 LLDSSP--SQWSVEQVCSFISTLPGCHDVAAEFGCQEIDGQALLLLTEDHLMSAMNLKLGPALKI 880

  Fly  1568 VAKVESIKE 1576
            .|.:.::|:
Zfish   881 CAHINTLKQ 889

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ph-pNP_476871.2 DUF5585 1015..>1232 CDD:465521 44/235 (19%)
SAM_Ph1,2,3 1508..1576 CDD:188976 39/67 (58%)
phc3NP_001430217.1 None

Return to query results.
Submit another query.