DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ph-p and phc1

DIOPT Version :10

Sequence 1:NP_476871.2 Gene:ph-p / 31181 FlyBaseID:FBgn0004861 Length:1589 Species:Drosophila melanogaster
Sequence 2:NP_991270.2 Gene:phc1 / 403008 ZFINID:ZDB-GENE-081022-39 Length:897 Species:Danio rerio


Alignment Length:1088 Identity:257/1088 - (23%)
Similarity:393/1088 - (36%) Gaps:294/1088 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   570 NQPDGTQGMFIQQQPATQTLQTQQNQIIQCNVTQTPTKARTQLDALAPKQQQQQQQVGTTNQTQQ 634
            ::|.....|.:.::.|.|.||..|.|                     |...|..||:     ..|
Zfish    23 SRPPQIAQMSLYERQAVQALQALQRQ---------------------PNAAQYFQQL-----MLQ 61

  Fly   635 QQLAVATAQLQQ--QQQQLTAAALQRPGAPVMPHNGTQVRPASSVSTQTAQNQSLLKA--KMRNK 695
            ||:..||.||..  ..||.|.||.::..:|    |.:..:|.|  |.|...|.|...|  .|.| 
Zfish    62 QQINSATCQLHNLAAVQQATLAASRQSSSP----NNSASQPTS--SAQCTVNLSTTSAGGTMTN- 119

  Fly   696 QQPVRPALATLKTEIGQ--VAGQNKVVGHLTTVQQQQQATNLQQVVNAAGNKMVVMSTTGTPITL 758
            .:|:.||.:...|.:.|  :.|.|       :..|.|....:.:.:.|.....::....||    
Zfish   120 PRPIGPATSAASTALSQSVLLGGN-------SGGQGQMYLRVNRSLRAPLTPQLIFMPGGT---- 173

  Fly   759 QNGQTLHAATAAGVDKQQQQLQLFQKQQILQQQQMLQQQIAAIQMQQQQAAVQAQQQQQQQVSQQ 823
               .|...||.|....|||.                       |.||||.|.......|   |..
Zfish   174 ---ATATVATVAQTQPQQQP-----------------------QQQQQQEATPTSSSSQ---SDN 209

  Fly   824 QQVNAQQQQAVAQQQQAVAQAQQQQREQQQQVAQAQAQHQQALANATQQILQVAPNQFITSHQQQ 888
            .||.....:.|:..:.|..:.:...|::.........|.|             .|.||..|.|| 
Zfish   210 DQVQNLAMRCVSTPRAATVKTEFADRKETTGTFPLNQQTQ-------------TPQQFGQSTQQ- 260

  Fly   889 QQQQLHNQLIQQQLQQQAQAQVQAQVQAQAQQQQQQREQQQNIIQQIVVQQSGATSQQTSQQQQH 953
                     :|.|.|..|.|::|: ....|.........:.|....:..||:||:|...|..   
Zfish   261 ---------VQPQTQPLANAKLQS-FSNTANPSVPALNVKPNNQSAVAPQQAGASSNPPSSS--- 312

  Fly   954 HQSGQLQLSSVPFSVSSSTTPAGIATSSALQAALSASGAIFQTAKPGTCSSSSPTSSVVTITNQS 1018
             .:..|.||.:..|.|......|:..|:|     :.:..:..|:...|.:...|..:|.|.:|.:
Zfish   313 -PTPSLPLSQLLLSQSGLHQTRGVPASTA-----TVTHILVPTSNVPTSTQGYPLGTVATKSNMT 371

  Fly  1019 STPLVTSSTVASIQQA------------------QTQSAQVHQHQQLISATIAGGTQQQPQGPPS 1065
            :..||    |..:||.                  |.::||.|:..          .|..|:.||.
Zfish   372 AQTLV----VQPLQQTGANLSTEKLAHGTGHVPIQPKTAQGHRVP----------VQMSPRHPPP 422

  Fly  1066 LTPT----------TNPILAMTSMMNATVGHLSTAPPVTVSVTSTAVT----------SSPGQLV 1110
            :.|.          .:|......::.|....|..:..:.::...|..:          ::||.:|
Zfish   423 ILPAPPNNGQATAGLHPPHVPVQLVGARQSTLGNSQALALAQARTCCSQQDGTAAVGVNNPGNVV 487

  Fly  1111 LLSTA--SSGGGGSIPATPTKETPSKGPTATLVPIGSPKTPVSGKDTCTTPKSSTPATVSASVEA 1173
            .:.||  :||.|..:..           ..:.:||...:|..|...|     ...||:|:.|::.
Zfish   488 TMVTAMDTSGAGMCLKT-----------AQSALPISQMQTNQSAVLT-----QGNPASVTHSMDG 536

  Fly  1174 SSSTGEALSNGDASDRSSTPSKGATTPTSKQSNAAVQPPSSTTPNSVSGKEEPKLA-TCGSLTSA 1237
            .:::|::|....|    ....|.|..|..::|.:.:....|..|  :||  .|.:. :...|:.|
Zfish   537 QNNSGDSLFVQSA----QAQIKPAIGPIKRKSESDLTHEISNEP--ISG--SPSMQDSAPPLSPA 593

  Fly  1238 TSTSTTTTITNGIGVARTTASTAVSTASTTTTSSGTFITSCTSTTTTTTSSISNGSK-DLPKAMI 1301
            .|..|...|             |.|:..|.:          .|...........|.: .:|:|::
Zfish   594 PSLDTVPEI-------------AFSSPPTLS----------LSLPVPLPRGAGQGDRAPVPQAVV 635

  Fly  1302 KPNVLTHVIDGFIIQEANEPFPVTRQRYADKDVSDEPPKKKATMQEDIKLSGIASAPGSDMVACE 1366
            ||.||||:|:||:|||..||||||...   |::|...|  .....|||:         ||.:.||
Zfish   636 KPQVLTHLIEGFVIQEGAEPFPVTGPL---KELSGAVP--PILHPEDIR---------SDKLKCE 686

  Fly  1367 QCGKMEHKAKLKR-KRYCSPGCSR----------QAKNGIGGVGSGETNGLGTGGIVGVDAMALV 1420
            .|......::.:| ||:|:..||:          :|..|:.|...      ..||.|..|.:|  
Zfish   687 YCLNFAPASQFRRSKRFCTISCSKRYNVSFRNHLRASRGLEGAER------PAGGPVVQDVIA-- 743

  Fly  1421 DRLDEAMAEEKMQTEATPKLSESFPILGASTEVPPMSLPVQA----------------------A 1463
                         ....|:.|.|..   |..::....|||:.                      :
Zfish   744 -------------RRRAPRRSSSEI---ACAKITGRHLPVKCRSESSRSDDISSCEGEEEEDFLS 792

  Fly  1464 ISAPSPLAMPLGSPLSVALPTLAPLSVVTSGAAPKSSEVNGTDRPPISSWSVDDVSNFIRELPGC 1528
            :|..|..:.|..:.....|...||      |..|.......:..|  :.|||.:|..||..|.||
Zfish   793 LSPSSTFSCPRPTHCGPQLDDTAP------GGLPVDENHFLSGNP--ADWSVQEVCQFISSLQGC 849

  Fly  1529 QDYVDDFIQQEIDGQALLLLKEKHLVNAMGMKLGPALKIVAKVESIKE 1576
            :|....|:.||||||||:||||:||::.|.:||||||||.|.:.|:::
Zfish   850 EDLASQFLSQEIDGQALMLLKEEHLMSTMNIKLGPALKICASINSLRD 897

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ph-pNP_476871.2 DUF5585 1015..>1232 CDD:465521 48/257 (19%)
SAM_Ph1,2,3 1508..1576 CDD:188976 37/67 (55%)
phc1NP_991270.2 None

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