DRSC/TRiP Functional Genomics Resources

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Protein Alignment ph-p and Phc2

DIOPT Version :10

Sequence 1:NP_476871.2 Gene:ph-p / 31181 FlyBaseID:FBgn0004861 Length:1589 Species:Drosophila melanogaster
Sequence 2:NP_001013187.2 Gene:Phc2 / 313038 RGDID:1307912 Length:850 Species:Rattus norvegicus


Alignment Length:953 Identity:252/953 - (26%)
Similarity:378/953 - (39%) Gaps:224/953 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   738 VVNAAGNKMVVMSTTGTPITLQNGQTLHAATAAGVDKQ--QQQLQLF------QKQQILQQQQML 794
            |.:.:....:..:|:||     |..:..::::.|...:  ..|:.::      |..|::||....
  Rat     7 VPHTSSRASITTNTSGT-----NSSSGCSSSSGGGSGRPTAPQISVYSGIPDRQTVQVIQQALHR 66

  Fly   795 QQQIAAIQMQQQQAAVQAQQQQQQQVSQQQQVNAQQQQAVAQQQQAVAQAQQQQREQQQQV-AQA 858
            |...||..:||..||.|.....|....|||.:::.|.|::|..|||...|.:|.......| :||
  Rat    67 QPSTAAQYLQQMYAAQQQHLMLQTAALQQQHLSSAQLQSLAAVQQASLVANRQGSTSGSSVSSQA 131

  Fly   859 QAQHQQ---ALANATQQILQVAP--NQFITSHQQQQQQQLHN----QLIQQQLQQQAQAQ----- 909
            .||...   |.:.|..|::..|.  |....|...||...|.|    .|...|.|...:||     
  Rat   132 PAQSSSLNLAASPAAAQLINRAQSVNSATASGLAQQAVLLGNTSSPALTASQAQMYLRAQMLIFT 196

  Fly   910 -------VQAQVQAQAQQQQQQREQQQNIIQQIVVQQSGATSQQTSQQQQHHQSGQLQLSSVPFS 967
                   ||.::...:..:.....|.||:               |.:.||...:.....:|.|  
  Rat   197 PTATVATVQPELGTGSPARPPTPAQVQNL---------------TLRTQQTPAAAAAAAASGP-- 244

  Fly   968 VSSSTTPAGIATSSALQAALSASGAIFQTAKPGTCSSSSPTSSVVTITNQSSTPLVTSS------ 1026
              :.|.|  :..|.||:...|:|..:..|.:..|....||..:..::|:..:.||.|..      
  Rat   245 --APTQP--VLPSLALKPTPSSSQPLPPTPQGRTVVQGSPVGAKPSVTDNVTEPLKTDGNSNMEA 305

  Fly  1027 ----------TVASIQQAQTQSAQVHQHQQLISAT--------IAGGTQQQPQGPPSLTP--TTN 1071
                      |||:.|.......|:..||.|...:        :|   ||||| ||..||  .:.
  Rat   306 RPGPDRATVPTVATHQLTAPAYTQLQPHQLLPQPSSKHPQPQFVA---QQQPQ-PPRPTPQVQSQ 366

  Fly  1072 PILAMTS----MMNATVGHLSTAPPVTVSV---TSTAVTSSPG--QLVLLSTASSGGGGSIPATP 1127
            |.||..|    :..:..||.....|||.::   .|||....||  |...|.|..||.....|   
  Rat   367 PQLAAVSPSLALQPSPEGHAMPLGPVTQALPLQCSTAHVHKPGSSQQCHLPTPDSGSQNGHP--- 428

  Fly  1128 TKETPSKGP------TATLVPIGSPKTPVSGKDTCTTPKSSTPATVSASVEASSSTGEALSNGDA 1186
              |..|..|      |:.::....|.:||        |:...|......|.|..|.         
  Rat   429 --EGVSHAPQRRFQHTSAVILQLQPASPV--------PQQCAPDDWKEVVPAEKSV--------- 474

  Fly  1187 SDRSSTPSKGATTPTSKQSNAAVQPPSSTTPNSVSGKEEPKLATCGSLTSATSTSTTTTITNGIG 1251
                     ..|.|.......|:   .:..|..:.|.:.|.:..|    .|..|        |.|
  Rat   475 ---------PVTRPGLSPHQQAI---ITAIPGGLPGPKSPNIQQC----PAHET--------GQG 515

  Fly  1252 VARTTASTAVSTASTTTTSSGTFITSCTSTTTTTTSSISNGSKDLPKAMIKPNVLTHVIDGFIIQ 1316
            :..         |.|..:|.|....:..|.::.|.::..||....|:|::||.:|||||:||:||
  Rat   516 IVH---------ALTDLSSPGMTSGNGNSASSITGTAPQNGENKPPQAIVKPQILTHVIEGFVIQ 571

  Fly  1317 EANEPFPVTR---------QRYADKDVSDEPPKKKATMQEDIKLS----GIASAPGSDM-VACEQ 1367
            |..|||||.|         ::||...:.::.|::..|...|.::.    ..:...|:.: :.||.
  Rat   572 EGAEPFPVGRSSLLVGNLKKKYAQGFLPEKLPQQDHTTTTDSEMEEPYLQESKEEGTPLKLKCEL 636

  Fly  1368 CGKMEHKAKLKR-KRYCSPGCSRQAKNGIGGVGSGETNGLGTGGIVGVDAMALVDRLDEAMAEEK 1431
            ||:::...|.|| ||:||..|:::.     .||..:..||...           ||       .|
  Rat   637 CGRVDFAYKFKRSKRFCSMACAKRY-----NVGCTKRVGLFHS-----------DR-------SK 678

  Fly  1432 MQTEATPKLSE------SFPILGASTEVPP---MSLPVQAAIS-APSPLAMPLGSPLSVALPTLA 1486
            :|...|...:.      |.|.|...|:..|   :.|.|.||:. |.|.......|..|.....|:
  Rat   679 LQKAGTTTHNRRRASKASLPTLTKDTKKQPSGTVPLSVTAALQLAHSQEDSSRCSDNSSYEEPLS 743

  Fly  1487 PLSVVTSGAAPKS-------SEVNGTD-----------RPPISSWSVDDVSNFIRELPGCQDYVD 1533
            |:|..:|.:..:.       |:::..|           .|  :.|:|:||..|||.|||||:..:
  Rat   744 PISASSSTSRRRQGQRDLELSDMHMRDLVGMGHHFLPSEP--TKWNVEDVYEFIRSLPGCQEIAE 806

  Fly  1534 DFIQQEIDGQALLLLKEKHLVNAMGMKLGPALKIVAKVESIKE 1576
            :|..|||||||||||||.||::||.:||||||||.|::..:|:
  Rat   807 EFRAQEIDGQALLLLKEDHLMSAMNIKLGPALKIYARISMLKD 849

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ph-pNP_476871.2 DUF5585 1015..>1232 CDD:465521 60/257 (23%)
SAM_Ph1,2,3 1508..1576 CDD:188976 40/67 (60%)
Phc2NP_001013187.2 Herpes_BLLF1 <141..559 CDD:282904 112/497 (23%)
PHC2_SAM_assoc 662..781 CDD:465202 28/136 (21%)
SAM_Ph1,2,3 781..849 CDD:188976 40/69 (58%)

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