DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16903 and CYCT1;3

DIOPT Version :10

Sequence 1:NP_569980.1 Gene:CG16903 / 31178 FlyBaseID:FBgn0040394 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_174084.1 Gene:CYCT1;3 / 839655 AraportID:AT1G27630 Length:317 Species:Arabidopsis thaliana


Alignment Length:215 Identity:58/215 - (26%)
Similarity:102/215 - (47%) Gaps:21/215 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 TPSSQDGLDHETEKDLRILGCELIQTAGILLRLPQVAMATGQVLFQRFFYSKSFVRHNMETVAMS 163
            :||.:||:|...|..||...|..:|..|:.|.:.||.::...|:..||:..:|..:::.:|:|.|
plant    45 SPSRKDGIDLVKESFLRSSYCTFLQRLGMKLHVSQVTISCAMVMCHRFYMRQSHAKNDWQTIATS 109

  Fly   164 CVCLASKIEEAPRRIRDVINVFHHI-------KQVRA-QKEISPMVLDPYYTNLKMQVIKAERRV 220
            .:.||.|.|:.|.::..|:...:.|       ..:|. |.|.        |...|..::..|..:
plant   110 SLFLACKAEDEPCQLSSVVVASYEIIYEWDPSASIRIHQTEC--------YHEFKEIILSGESLL 166

  Fly   221 LKELGFCVHVKHPHKLIVMYLQVLQYEKHEKLMQLSWNFMNDSLRTDVFMRYTPEAIACACIYLS 285
            |....|.:.::.|:|.:...|..|  .....|...:|||::|.:||.:.::|.|..||.|.::|:
plant   167 LSTSAFHLDIELPYKPLAAALNRL--NAWPDLATAAWNFVHDWIRTTLCLQYKPHVIATATVHLA 229

  Fly   286 ARKLNIPLPNSPPW---FGI 302
            |...|..:.:...|   ||:
plant   230 ATFQNAKVGSRRDWWLEFGV 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16903NP_569980.1 CYCLIN_CCNL1_rpt1 104..227 CDD:410292 33/130 (25%)
CYCLIN_CCNL_rpt2 232..323 CDD:410236 22/74 (30%)
SDP_N <440..>482 CDD:463517
CYCT1;3NP_174084.1 CYCLIN_AcCycT_rpt1 50..173 CDD:410290 33/130 (25%)
CYCLIN_AcCycT_rpt2 177..266 CDD:410291 22/75 (29%)
Blue background indicates that the domain is not in the aligned region.

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