DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16903 and AT5G48630

DIOPT Version :10

Sequence 1:NP_569980.1 Gene:CG16903 / 31178 FlyBaseID:FBgn0040394 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_001190493.1 Gene:AT5G48630 / 834920 AraportID:AT5G48630 Length:256 Species:Arabidopsis thaliana


Alignment Length:251 Identity:60/251 - (23%)
Similarity:118/251 - (47%) Gaps:22/251 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 PEGKIDVTP-SSQDGLDHETEKDLRILGCELIQTAGILLRLPQVAMATGQVLFQRFFYSKSFVRH 155
            ||....|.| .:|.|:..|..:.:::.....|......:::.|..:||.....:|.:..||...:
plant    20 PEEVNVVHPLDAQRGISVEDFRLIKLHMSNYISKLAQHIKIRQRVVATAVTYMRRVYTRKSLTEY 84

  Fly   156 NMETVAMSCVCLASKIEEAPRRIRDVINVFHHIKQVRAQKEISPMVLDPYYTNLKMQVIKAERRV 220
            ....||.:|:.||.|.||:.  :...:.|| ::|::.|.::....:.|         :::.|.:|
plant    85 EPRLVAPTCLYLACKAEESV--VHAKLLVF-YMKKLYADEKFRYEIKD---------ILEMEMKV 137

  Fly   221 LKELGFCVHVKHPHKLIVMYLQVLQYEKHEKLMQLSWNFMNDSLRTDVFMRYTPEAIACACIYLS 285
            |:.|.|.:.|.||::.:..:||.... ....:..|:|..:||:.|.|:.:.:.|..|..||||::
plant   138 LEALNFYLVVFHPYRSLPEFLQDSGI-NDTSMTHLTWGLVNDTYRMDLILIHPPFLITLACIYIA 201

  Fly   286 A--RKLNIPLPNSPPWFGIFRVPMADITDICYRVMELYMRSKPVV-EKLEAAVDEL 338
            :  ::.:|     ..||....|.|..:.:|...:::.|...:... |::.||.::|
plant   202 SVHKEKDI-----KTWFEELSVDMNIVKNIAMEILDFYENHRLFTEERVHAAFNKL 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16903NP_569980.1 CYCLIN_CCNL1_rpt1 104..227 CDD:410292 26/122 (21%)
CYCLIN_CCNL_rpt2 232..323 CDD:410236 23/92 (25%)
SDP_N <440..>482 CDD:463517
AT5G48630NP_001190493.1 CYCLIN_AtCycC_rpt1 38..144 CDD:410274 25/117 (21%)
CYCLIN_AtCycC_rpt2 149..252 CDD:410275 26/108 (24%)
Blue background indicates that the domain is not in the aligned region.

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