DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG16903 and ccnk

DIOPT Version :10

Sequence 1:NP_569980.1 Gene:CG16903 / 31178 FlyBaseID:FBgn0040394 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_001157251.1 Gene:ccnk / 569432 ZFINID:ZDB-GENE-030131-5126 Length:539 Species:Danio rerio


Alignment Length:383 Identity:99/383 - (25%)
Similarity:170/383 - (44%) Gaps:50/383 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 TPSSQDGLDHETEKDLRILGCELIQTAGILLRLPQVAMATGQVLFQRFFYSKSFVRHNMETVAMS 163
            |||..| ||..||...|..|...|...|..|.|....:|||...|.||:...||.:.........
Zfish    36 TPSQSD-LDPATEARYRREGARFIFDVGTRLGLHYDTLATGITYFHRFYMFHSFKQFPRYVTGAC 99

  Fly   164 CVCLASKIEEAPRRIRDVINVFHHIKQVRAQKEISPMVLDPYYTNLKMQVIKAERRVLKELGFCV 228
            |:.||.|:||.|::.:|:|..        |:..::.:....:..:.|.:|:..||.:|:.:.|.:
Zfish   100 CLFLAGKVEETPKKCKDIIKT--------ARSLLNDVQFAQFGDDPKEEVMVLERILLQTIKFDL 156

  Fly   229 HVKHPHKLIVMYLQVLQYEKH--EKLMQLSWNFMNDSLRTDVFMRYTPEAIACACIYLSARKLNI 291
            .|:||::.::.|.:.|:.:|:  :||:|::|.|:||||.|.:.:::.||.||.|.:||:.|....
Zfish   157 QVEHPYQFLLRYAKQLKGDKNKVQKLVQMAWTFVNDSLCTMLSLQWEPEIIAVAVMYLAGRLCKF 221

  Fly   292 PL------PNSPPWFGIF--RVPMADITDICYRVMELYMRSKPVVEKLEAAVDELKKRYIDARNK 348
            .:      .:|..|:..|  .||:..:.|||:::::||.:.|..:.:.....|:.|         
Zfish   222 DIQEWTSKQSSRRWWEQFVQDVPVELLEDICHQILDLYSQGKQPIPQQPPMQDKEK--------- 277

  Fly   349 TKEANTPPAVITVDRNNGSHNAWGGFIQRAIPLPLPSEK-SPQKDSRSRSRSRTRTHSRTPR--- 409
                 .||........:|:.|.         |...||:| |||....::.:.:..:....|:   
Zfish   278 -----PPPPPAAPPGQSGAQNP---------PAQPPSKKNSPQASPPAKIKRQHVSPKDEPKAPA 328

  Fly   410 ----SRSPRSRSPSRERTKKTHRSRSSRSRSRSPPKHKKKSRHYSRSPTRSNSPHSKH 463
                |:.||..||...........|.:.|...:||...:.:......|.:..:|...|
Zfish   329 EQVGSKIPRLESPMPPLPVSQPPERKTPSAIPAPPAEAEPAAASELDPAQGPAPPLPH 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16903NP_569980.1 CYCLIN_CCNL1_rpt1 104..227 CDD:410292 34/122 (28%)
CYCLIN_CCNL_rpt2 232..323 CDD:410236 33/100 (33%)
SDP_N <440..>482 CDD:463517 4/24 (17%)
ccnkNP_001157251.1 CYCLIN_CCNK_rpt1 42..155 CDD:410233 33/120 (28%)
CYCLIN_CCNK_rpt2 159..259 CDD:410234 31/99 (31%)

Return to query results.
Submit another query.