DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16903 and ccnh

DIOPT Version :10

Sequence 1:NP_569980.1 Gene:CG16903 / 31178 FlyBaseID:FBgn0040394 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_001016256.1 Gene:ccnh / 549010 XenbaseID:XB-GENE-922561 Length:323 Species:Xenopus tropicalis


Alignment Length:265 Identity:55/265 - (20%)
Similarity:103/265 - (38%) Gaps:72/265 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 LPQVAMATGQVLFQRFFYSKSFVRHNMETVAMSCVCLASKIEEAPRRIRDVINVFHHIKQVRAQK 195
            :|:..:.|..:..:||:.:.|.:.|:...:.::||.||.|::|            .::..|:...
 Frog    75 MPKSVLGTACMYLKRFYLNNSVMEHHPRIIMLTCVFLACKVDE------------FNVSSVQFVG 127

  Fly   196 EISPMVLDPYYTNLKMQVIKAERRVLKELGFCVHVKHPHK-----LIVMYLQVLQYEKHEKLMQL 255
            .:....|.  ...:..|:::.|..::::|.|.:.|.:|::     ||.:..:....|..|.|.:.
 Frog   128 NLGENPLG--QEKILEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDLKTRYPMLENPEMLRKS 190

  Fly   256 SWNFMNDSLRTDVFMRYTPEAIACACIYLSARKLNIPLPNSPPWFGIFRVPMADITDICYRVME- 319
            :..|:|....||..:.:.|..||...|..:|.:..:.:.:.             :|: |..:.| 
 Frog   191 ADEFLNRVALTDACLLFAPSVIALTAILSTASRAGLNMESY-------------LTE-CLSLKEN 241

  Fly   320 ------LY---MRSKPVVEKLEAA----VDELKKR-------------------------YIDAR 346
                  ||   .|.|.:|.|.|.|    |..||||                         ||..:
 Frog   242 QETMSHLYDGMRRLKILVSKYEPARSDEVAVLKKRLENCHSTEVTLSINARKRKGYEDDGYISKK 306

  Fly   347 NKTKE 351
            .||:|
 Frog   307 PKTEE 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16903NP_569980.1 CYCLIN_CCNL1_rpt1 104..227 CDD:410292 17/95 (18%)
CYCLIN_CCNL_rpt2 232..323 CDD:410236 20/105 (19%)
SDP_N <440..>482 CDD:463517
ccnhNP_001016256.1 ccl1 2..308 CDD:129660 52/260 (20%)
Blue background indicates that the domain is not in the aligned region.

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