DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16903 and ccnc

DIOPT Version :10

Sequence 1:NP_569980.1 Gene:CG16903 / 31178 FlyBaseID:FBgn0040394 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_956245.1 Gene:ccnc / 335429 ZFINID:ZDB-GENE-030131-7369 Length:283 Species:Danio rerio


Alignment Length:289 Identity:80/289 - (27%)
Similarity:136/289 - (47%) Gaps:41/289 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 KIDVTPSSQDGLDHETEKD---LRILGCELIQTAGILLRLPQVAMATGQVLFQRFFYSKSFVRHN 156
            |.|:....|..|...||::   |:|....:||..|..|:|.|..:||..|.|:||     :.|::
Zfish    18 KQDLMKERQKDLKFLTEEEYWKLQIFFANVIQALGEHLKLRQQVIATATVYFKRF-----YARYS 77

  Fly   157 METV-----AMSCVCLASKIEE-----APRRIRDVINVFHHIKQVRAQKEISPMVLDPYYTNLKM 211
            ::::     |.:||.||||:||     ..|.|....:|..........||.      |:..|   
Zfish    78 LKSIDPVLMAPTCVFLASKVEEFGVVSNTRLISAATSVLKTRFSYAFPKEF------PFRMN--- 133

  Fly   212 QVIKAERRVLKELGFCVHVKHPHKLIVMYLQVLQYEKHEKLMQLSWNFMNDSLRTDVFMRYTPEA 276
            .:::.|..:|:.:..|:.|.||::.::.|:|.:..|  :.|:.|:|..:||:.|||:.:.|.|..
Zfish   134 HILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQE--DMLLPLAWRIVNDTYRTDLCLLYPPFM 196

  Fly   277 IACACIYLSARKLNIPLPNSPPWFGIFRVPMADITDICYRVMELYMRSKPVVEKLEAAVDELKKR 341
            ||.||::::.   .:...::..||....|.|..|.:|...:::||.:.|...::.|.|.      
Zfish   197 IALACLHVAC---VVQQKDARQWFAELSVDMEKILEIIRVILKLYDQWKNFDDRKEIAA------ 252

  Fly   342 YIDARNKTKEANTPPAVITVDRNNGSHNA 370
               ..||..:...||...|...:|||.|:
Zfish   253 ---VLNKVPKPKPPPNSETDQSSNGSQNS 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16903NP_569980.1 CYCLIN_CCNL1_rpt1 104..227 CDD:410292 36/135 (27%)
CYCLIN_CCNL_rpt2 232..323 CDD:410236 27/90 (30%)
SDP_N <440..>482 CDD:463517
ccncNP_956245.1 CYCLIN_CCNC_rpt1 40..146 CDD:410217 33/119 (28%)
CYCLIN_CCNC_rpt2 154..245 CDD:410218 28/95 (29%)
Blue background indicates that the domain is not in the aligned region.

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