DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16903 and ccnt1

DIOPT Version :10

Sequence 1:NP_569980.1 Gene:CG16903 / 31178 FlyBaseID:FBgn0040394 Length:560 Species:Drosophila melanogaster
Sequence 2:XP_005162427.2 Gene:ccnt1 / 334465 ZFINID:ZDB-GENE-030131-6397 Length:713 Species:Danio rerio


Alignment Length:541 Identity:118/541 - (21%)
Similarity:204/541 - (37%) Gaps:124/541 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 KIDVTPSSQDGLDHETEKDLRILGCELIQTAGILLRLPQVAMATGQVLFQRFFYSKSFVRHNMET 159
            :|:.:||.:.|||.:.|...|.....|:|..|..|.:.|:.:.|..|...||:..:||.|.:...
Zfish    21 QIENSPSRRAGLDPDKELSYRQQAANLLQDMGQRLNVSQLTINTAIVYMHRFYMVQSFTRFHRNV 85

  Fly   160 VAMSCVCLASKIEEAPRRIRDVINVFHHIKQVRAQKEISPMVLDPYYTNLKMQVIKAERRVLKEL 224
            :|.:.:.||:|:||.||::..||.|.|....   .::.||......|......::..|..:|:.|
Zfish    86 IAPAALFLAAKVEEQPRKLEHVIKVTHACLN---PQDPSPDTRSDTYLQQAQDLVILESIILQTL 147

  Fly   225 GFCVHVKHPHKLIVMYLQVLQYEKH-------------------------------------EKL 252
            ||.:.:.|||..:|...|:::.|..                                     :.|
Zfish   148 GFEITIDHPHTHVVKCTQLVRGENQLLTLNCASYCSVKGTSSTPSSQISRLIMSFPFIVPASKDL 212

  Fly   253 MQLSWNFMNDSLRTDVF-MRYTPEAIACACIYLSARKLNIPLPNSPP---WFGIF--RVPMADIT 311
            .|.|:....:||....| ::|:|..:||.||:|:.:..|..:|.|..   |:...  .|.:..:.
Zfish   213 AQTSYFMATNSLHLTTFCLQYSPPIVACVCIHLACKWSNWEIPVSTDGKHWWQYVDPTVTLELLD 277

  Fly   312 DICYRVMELYMRSKPVVEKL---EAAVDELKKRYIDARNKTKEANTPPAVITVDRNNGSHNAWGG 373
            ::.:..:::..::...:::.   :||....||      :|.::.:...|::.:...:.|.:...|
Zfish   278 ELTHEFLQILEKTPSRLKRTRNWKAAGQTAKK------SKVQDGDQSEAIMNMISMSSSDSTLAG 336

  Fly   374 FIQRAIPLPLPSEKSPQKDSRSRSRSRTRTHSRTPRSRSPRSR--------SPSRERTK------ 424
            ....:.|   |:..|....:...|.:.:..|.:.|....|.:.        |.|..|.|      
Zfish   337 LTSLSAP---PTGSSMDSCADEHSAAASAQHWQPPSKEQPTANELHAPAKVSLSEYRAKHADELA 398

  Fly   425 -----------KTHRSRSSRSRSRSPPKHKKKSRHYSR-SPTRSNSPHSKHRKSKSSRERSEYYS 477
                       ...:..::.:::....:.|.|..|:.: |.:.:|:|.....|.... ||||..|
Zfish   399 AQKRELKNMEASVKQGYATAAQALMNQQRKDKHHHHQQTSASDTNNPSPIVLKIPLD-ERSERSS 462

  Fly   478 KKDRSGNPGSSNNLGDGDKYRNSVSNSGKHSRYSSSSSR--------------RNSGGGGDGRSG 528
            .|.|...||.|               .|.||..|.||||              |..|.|.||:| 
Zfish   463 IKMRLPVPGQS---------------GGGHSHSSGSSSRGSDQDIKVRIRVPDRRGGSGEDGKS- 511

  Fly   529 GGGGGGGGGNGNHGSRGGHKH 549
                     ...|..|..|.|
Zfish   512 ---------REKHRERSNHHH 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16903NP_569980.1 CYCLIN_CCNL1_rpt1 104..227 CDD:410292 36/122 (30%)
CYCLIN_CCNL_rpt2 232..323 CDD:410236 24/133 (18%)
SDP_N <440..>482 CDD:463517 13/42 (31%)
ccnt1XP_005162427.2 None

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