DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16903 and cic-1

DIOPT Version :10

Sequence 1:NP_569980.1 Gene:CG16903 / 31178 FlyBaseID:FBgn0040394 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_497548.2 Gene:cic-1 / 175357 WormBaseID:WBGene00000506 Length:302 Species:Caenorhabditis elegans


Alignment Length:251 Identity:59/251 - (23%)
Similarity:98/251 - (39%) Gaps:39/251 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 AGILLRLPQVAMATGQVLFQRFFYSKSFVRHNMETVAMSCVCLASKIEEAPRRIRDVINVFHHIK 189
            |.:..:|.|..:||..:.|:||:..:||.......||.:.:.||.|:||            |...
 Worm    60 ANVGCKLRQQVIATAIIYFKRFYLRQSFRDMCPFLVASTALFLACKVEE------------HTTL 112

  Fly   190 QVRAQKEISPMVLDPYY------TNLKMQVIKAERRVLKE-LGFCVHVKHPHKLIVMYLQVL-QY 246
            .|.:..:.:.:||...:      |:.|..|:.....:|.| |..|:.|.|..:.:...|:.| |:
 Worm   113 SVSSFLKNTAIVLPKRWGVTFETTSTKNGVVYDSEFILVEILDCCLVVHHASRPMFELLEDLKQF 177

  Fly   247 EKH-----------EKLMQLSWNFMNDSLRTDVFMRYTPEAIACACIYLSARKLNIPLPNSPPWF 300
            .:.           |.:........|||||.||.:.:.|..|..:.| :.|.:|.........|.
 Worm   178 TQQSTIANQPIKDLEAIEAQCQKVANDSLRCDVSLIFPPHVIGLSSI-MVAMELMGRGEELEAWL 241

  Fly   301 GIFRVPMADITDICYRVMELYMRSKPVVEKLEAAVDELKKRYIDARNKTKEANTPP 356
            .........:||...::.::|...|...||     :|:||  :.|:........||
 Worm   242 VEVDTDFEKVTDCVEQIYKMYTLWKSFDEK-----EEVKK--LMAKLPKPNQQPPP 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16903NP_569980.1 CYCLIN_CCNL1_rpt1 104..227 CDD:410292 27/108 (25%)
CYCLIN_CCNL_rpt2 232..323 CDD:410236 21/102 (21%)
SDP_N <440..>482 CDD:463517
cic-1NP_497548.2 ccl1 8..281 CDD:129660 57/240 (24%)
CYCLIN_CCNC_rpt1 40..154 CDD:410217 26/105 (25%)
Blue background indicates that the domain is not in the aligned region.

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