Protein Alignment CG16903 and Ccnl1

DIOPT Version :10

• Sequence 1: NP_569980.1
• Gene: CG16903 / 31178
• FlyBaseID: FBgn0040394
• Length: 560
• Species: Drosophila melanogaster
• Sequence 2: NP_446114.1
• Gene: Ccnl1 / 114121
• RGDID: 620864
• Length: 527
• Species: Rattus norvegicus
• Alignment Length: 543
• Identity: 257/543 - (47%)
• Similarity: 322/543 - (59%)
• Gaps: 78/543 - (14%)

  Fly    45 SSSGAAPGADAAGGDAGGVAAAQADANKPIY--PRLFNRIVLTLENSLIPEGKIDVTPSSQDGLD 107
            |:|.|||   :|||.:.|...........|.  .||::.:.||:::|:|||.::..|||.|||||
  Rat    15 SASSAAP---SAGGSSSGTTTTTTTTTGGILIGDRLYSEVSLTIDHSVIPEERLSPTPSMQDGLD 76

  Fly   108 HETEKDLRILGCELIQTAGILLRLPQVAMATGQVLFQRFFYSKSFVRHNMETVAMSCVCLASKIE 172
            ..:|.|||||||||||.|||||||||||||||||||.|||||||||:|:.|.|||:|:.||||||
  Rat    77 LPSETDLRILGCELIQAAGILLRLPQVAMATGQVLFHRFFYSKSFVKHSFEIVAMACINLASKIE 141

  Fly   173 EAPRRIRDVINVFHHIKQVRAQKEISPMVLDPYYTNLKMQVIKAERRVLKELGFCVHVKHPHKLI 237
            |||||||||||||||::|:|.::..||::||..|.|.|.||||||||||||||||||||||||:|
  Rat   142 EAPRRIRDVINVFHHLRQLRGKRTPSPLILDQNYINTKNQVIKAERRVLKELGFCVHVKHPHKII 206

  Fly   238 VMYLQVLQYEKHEKLMQLSWNFMNDSLRTDVFMRYTPEAIACACIYLSARKLNIPLPNSPPWFGI 302
            |||||||:.|:::.|:|.:||:|||||||:||:|:.||.||||||||:||.|.||||..|.||.:
  Rat   207 VMYLQVLECERNQTLVQTAWNYMNDSLRTNVFVRFQPETIACACIYLAARALQIPLPTRPHWFLL 271

  Fly   303 FRVPMADITDICYRVMELYMRSKPVVEKLEAAVDELKKRYIDARNKTKEANT--PPAVITVDRNN 365
            |.....:|.:||...:.||.|.||..|.||..|::.|....:|:.|.|..|.  .||:.|:
  Rat   272 FGTTEEEIQEICIETLRLYTRKKPNYELLEKEVEKRKVALQEAKLKAKGLNLDGTPALSTL---- 332

  Fly   366 GSHNAWGGFIQRAIPLPLPS--------EKSP--------------------------QKDS-RS 395
                  |||    .|...||        ||||                          :||| ||
  Rat   333 ------GGF----SPASKPSSPREVKAEEKSPVSINVKTVKKEPEDRQQASKSPYNGVRKDSKRS 387

  Fly   396 R-SRSRTRTHSRTPRSRSPRSRSPSRERTKKTHRSRSSRSRSRSPPKHKKKSRHYSRSPTRSNSP 459
            | |||.:|:.||| |||| ||.:|.|....:..||.:..|||||      :||.:|.||.|.::.
  Rat   388 RNSRSASRSRSRT-RSRS-RSHTPRRHYNNRRSRSGTYSSRSRS------RSRSHSESPRRHHNH 444

  Fly   460 HSKHRKSKSSRE------RSEYYSKKDRSGNPGSSNNLGDGDKYRNSVSNSGKHSRYSSSSSRRN 518
            .|.|.|:|.:||      |..:..||.||.:...:.:..|       |:...:|.|......|..
  Rat   445 GSPHLKAKHTREDLKSSNRHGHKRKKSRSRSQSKTRDHSD-------VTKKHRHERGHHRDRRER 502

  Fly   519 SGGGGDGRSGGGGGGGGGGNGNH 541
            |........|...||...|:|.|
  Rat   503 SRSFERSHKGKHHGGSRSGHGRH 525

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG16903	NP_569980.1	CYCLIN_CCNL1_rpt1	104..227	CDD:410292	94/122 (77%)
		CYCLIN_CCNL_rpt2	232..323	CDD:410236	53/90 (59%)
		SDP_N	<440..>482	CDD:463517	15/47 (32%)
Ccnl1	NP_446114.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..37		9/24 (38%)
		CYCLIN_SF	41..196	CDD:477360	107/154 (69%)
		Cyclin-like 1	89..191		77/101 (76%)
		CYCLIN_SF	200..322	CDD:477360	65/121 (54%)
		Cyclin-like 2	204..288		48/83 (58%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	327..527		70/228 (31%)
		RS	391..433		22/49 (45%)