Protein Alignment Rtca and rtca

DIOPT Version :10

• Sequence 1: NP_569977.1
• Gene: Rtca / 31175
• FlyBaseID: FBgn0025630
• Length: 361
• Species: Drosophila melanogaster
• Sequence 2: NP_955830.1
• Gene: rtca / 321129
• ZFINID: ZDB-GENE-030131-9687
• Length: 363
• Species: Danio rerio
• Alignment Length: 360
• Identity: 147/360 - (40%)
• Similarity: 214/360 - (59%)
• Gaps: 5/360 - (1%)

  Fly     3 AEKMLEIDGSYLEGGGQALRNALSLSCILGKPVRVVKIRASRPSPGLSHQHLHGLNLLRDITNAD 67
            |....|:|||.:|||||.||.:.:||||.|..:::.||||.|.:|||..|||.||.||||:.|.:
Zfish     2 AATTFEMDGSVMEGGGQILRVSAALSCIQGASIKINKIRAGRSTPGLRPQHLSGLELLRDMCNGN 66

  Fly    68 VVGNYLLSSTVEFTPRTILDNTYRVETHTAASITLIYQMALPVLLFAGRPSRLIVSGGTNVDFAP 132
            :.|..:.||.:..||..|....:..:||||.|:||:.|::||..|||..||.|.:.||||.:.||
Zfish    67 LEGATVGSSEITLTPGKIKGGNHIADTHTAGSVTLLMQVSLPCALFAQGPSELCLKGGTNAEMAP 131

  Fly   133 PVEYMQEVLLPNLKHFGVSFDLKVQRYGFYPRGQGRCQLDVQPVTKLNSGKLVAFGRIKSVSGVA 197
            .::|..:|..|.::.|||.||..::..|:||:|.|...|.|.|..:|:...:...|.|..:.|.|
Zfish   132 QIDYTVKVFKPIVERFGVQFDCDLRMRGYYPKGGGEVVLKVNPAKELSPINMTERGNITKIYGRA 196

  Fly   198 YCAGRLPVNIAIDMQQTAQREIHRLWPSQQCSIEPIKHSRQKAFHNGAGILMTVNTTSDVVLGAS 262
            :.||.||..:|.||...|.|.|.:.......:|:.:: .:.||..||.||::...:::..:...|
Zfish   197 FVAGVLPFKLAKDMSTAAIRTIRKEIKDLYINIQSLQ-EKDKACGNGNGIIIIAESSTGCIFAGS 260

  Fly   263 ALGKKRIDGHVLGSEASCQLGDYMRKQVCVDDYMQDQLIIYMALAVGRSTMRTGKLTNHTRTAIN 327
            :||||.:....:|.||:..|...:|...|||:::||||||:||||.|.|.||||.:|.||:|||:
Zfish   261 SLGKKGVYADKVGIEAAEMLLRNIRHNGCVDEFLQDQLIIFMALANGTSRMRTGPITLHTQTAIH 325

  Fly   328 VAEQMTGVKFDVAM----EPGGQMLVSCKGLGHVN 358
            ||||:|..||.::.    ......::.|:|:|..|
Zfish   326 VAEQLTNAKFAISKAEDENANDTYIIECQGVGATN 360

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rtca	NP_569977.1	RNA_3prim_cycl	7..338	CDD:274563	141/330 (43%)
rtca	NP_955830.1	RNA_Cyclase_Class_II	8..339	CDD:238446	141/331 (43%)