Protein Alignment CG4199 and Sqor

DIOPT Version :10

• Sequence 1: NP_569976.1
• Gene: CG4199 / 31174
• FlyBaseID: FBgn0025628
• Length: 593
• Species: Drosophila melanogaster
• Sequence 2: NP_001041378.2
• Gene: Sqor / 691966
• RGDID: 1564504
• Length: 450
• Species: Rattus norvegicus
• Alignment Length: 327
• Identity: 65/327 - (19%)
• Similarity: 109/327 - (33%)
• Gaps: 86/327 - (26%)

  Fly   183 IVVGGGPSGAVAVETIRQEGFTGRLIFVCREDYLPYDRVKISKAMNLEIEQLRFRDEEFYKEYDI 247
            :|:||| ||.:.:.| |.:...|                    |.|:.|  :...:..||:
  Rat    47 LVLGGG-SGGITMAT-RMKRRVG--------------------AENVAI--VEPSERHFYQ---- 83

  Fly   248 ELWQ--GVAAEKLDTAQKE-------------------------LHCSNGYVVKYDKIYLATGC- 284
            .:|.  |..|::|.::.:.                         :...||..:.|..:.:|.|.
  Rat    84 PIWTLVGAGAKELSSSDRSTLSVIPSGVQWIQDRVAELNPDQNCIRTDNGKEISYRYLIIALGIQ 148

  Fly   285 ----------SAFRPPIPGVNLENVRTV----RELADTKAILASIT-PESRVVCLGS--SFIALE 332
                      ..|..|..|.|. :|:||    :.|.|.|...|..| |.:.|.|.|:  ..:.|.
  Rat   149 LDYEKIKGLPEGFAYPKIGSNY-SVKTVEKTWKALQDFKEGNALFTFPNTPVKCAGAPQKIMYLS 212

  Fly   333 AA----AGLVSKVQSVTVVGRENVPLKAAFGAEIGQRVLQ-LFEDNKVVMRMESGIAEIVGNEDG 392
            .|    .|..||...:.     |..|...||.:.....|| :..:..|.:..:..:.|:..::..
  Rat   213 EAYFRKTGKRSKANIIF-----NTALGTIFGVKKYADALQEIIRERNVSVNYKHNLIEVRADKQE 272

  Fly   393 KVSEVVLVDDTRLPCDLLILGTGSKLNTQFLAKSGVKVNRNGSVDV--TDFLESNVPDVYVGGDI 455
            .|.|.:............:|.....:::..:.|.....:..|.|||  ........|:|:..||.
  Rat   273 AVFENLDKPGETHVIHYEMLHVTPPMSSPDVLKRSPVADSAGWVDVDKETLQHKKYPNVFGIGDC 337

  Fly   456 AN 457
            .|
  Rat   338 TN 339

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4199	NP_569976.1	Rieske_AIFL_N	59..154	CDD:239560
		NirB	182..578	CDD:440863	65/327 (20%)
Sqor	NP_001041378.2	FadH2	71..389	CDD:440215	54/281 (19%)