DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4199 and aifm1

DIOPT Version :10

Sequence 1:NP_569976.1 Gene:CG4199 / 31174 FlyBaseID:FBgn0025628 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_001017244.1 Gene:aifm1 / 549998 XenbaseID:XB-GENE-1016872 Length:636 Species:Xenopus tropicalis


Alignment Length:504 Identity:104/504 - (20%)
Similarity:186/504 - (36%) Gaps:137/504 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 EVGNEGQVMLRAKRSDLVNNKRLKNMVRRKPDDQR----VFIVVGGGPSGAVAVETIRQEGFTGR 206
            |..:|.:.:...:.:.:|:|:.....|......|.    .|:::|||.:...|..:||......|
 Frog   116 ETIDEQKAVKEVEATGMVDNQTAPQTVESAHPAQLPSHVPFLLIGGGTASFAAARSIRARDPGAR 180

  Fly   207 LIFVCREDYLPYDRVKISKAMNLE-----IEQLRFRD------------EEFY---------KEY 245
            ::.|..|..|||.|..:||.:...     .|.|||:.            ..||         :..
 Frog   181 VLIVSDESELPYMRPPLSKELWFSEDPHVTETLRFKQWNGKERSIFFQPPSFYVPPEQLMSVENG 245

  Fly   246 DIELWQGVAAEKLDTAQKELHCSNGYVVKYDKIYLATGCSAFRPPIPGVNL--ENV--RTV--RE 304
            .:.:..|.....:|..:.::...:|..:.|:|..:|||  .....:|.:..  |.|  ||.  |.
 Frog   246 GVSVLTGKKVVHMDVRENKVKLDDGTQISYEKCLIATG--GVPRSLPAIERAGEEVTKRTTLFRR 308

  Fly   305 LADTKAILASITPESRVVCLGSSFIALEAAAGLVSKVQSVTVVGRENVPLKAAFGAEIGQRVLQL 369
            ::|.:.:.|..:....:..:|..|:..|.|..|          ||:        |.:....|:|:
 Frog   309 ISDFRTLEAISSSVGSITIIGGGFLGSELACAL----------GRK--------GTQTSLEVIQM 355

  Fly   370 FEDN----KV------------VMR-----MESGIAEIVGNEDGKVSEVVLVDDTRLPCDLLILG 413
            |.::    ||            |.|     :...:.:.|..::||: .:.|.|..::..|.::..
 Frog   356 FPESGNMGKVLPEYLSHWTTEKVQREGVNVLSDAVVKSVSYQNGKL-HIQLKDGRQVQTDHIVAA 419

  Fly   414 TGSKLNTQFLAKSGVKVNRN-GSVDVTDFLESNVPDVYVGGDIANAHIHGLAHDRVNIGHYQLAQ 477
            .|.:.||:....:|::::.: |...|...|::. .:|:|.||.|..:...|...||.  |:..|.
 Frog   420 VGLEPNTELAKSAGLELDGDFGGYRVNAELQAR-NNVWVAGDAACFYDIKLGRRRVE--HHDHAV 481

  Fly   478 YHGRVAAINMCGGVKKLEAVPFFFTLIF----GKGIRYAGHGSYKDVIIDGSMEDFKFVAYFINE 538
            ..||:|..||.|..|     |::...:|    |..:.|...|     |:|.::            
 Frog   482 VSGRLAGENMTGAAK-----PYWHQSMFWSDLGPEVGYEAIG-----IVDSAL------------ 524

  Fly   539 ADTVTAVASCGRDPIVAQFAELISQGKCLGRGQIEDPATREDWTKKLGQ 587
                         |.|..||:                ||.:|..|:..:
 Frog   525 -------------PTVGVFAK----------------ATEKDTPKRAAE 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4199NP_569976.1 Rieske_AIFL_N 59..154 CDD:239560 2/7 (29%)
NirB 182..578 CDD:440863 95/453 (21%)
aifm1NP_001017244.1 AIF-MLS <67..>114 CDD:464407
NirB 155..619 CDD:440863 98/465 (21%)
AIF_C 487..617 CDD:464279 20/109 (18%)
Blue background indicates that the domain is not in the aligned region.

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