Protein Alignment CG4199 and Sqor

DIOPT Version :10

• Sequence 1: NP_569976.1
• Gene: CG4199 / 31174
• FlyBaseID: FBgn0025628
• Length: 593
• Species: Drosophila melanogaster
• Sequence 2: NP_647877.1
• Gene: Sqor / 38514
• FlyBaseID: FBgn0035515
• Length: 457
• Species: Drosophila melanogaster
• Alignment Length: 527
• Identity: 105/527 - (19%)
• Similarity: 167/527 - (31%)
• Gaps: 189/527 - (35%)

  Fly    88 NDRLLAVGAKC------THYGAP--LQTGALGLGRVRCPWHGACFNLENGDIEDFPGLDSLPCYR 144
            |.||....::|      ||..||  ..|..|...||         |.|..:           |..
  Fly     2 NRRLPGTISQCQKLLLATHNHAPTAFSTRFLSTSRV---------NRERQE-----------CQV 46

  Fly   145 VEV-GNEGQVMLRAKRSDLVNNKRLKNMVRRKPDD----QRVFIVVGGGPSGAVAVETIRQEGFT 204
            :.| |..|...:.||.|..:.:.:   :|..:|:|    |.:|.::|||..
  Fly    47 LVVGGGTGGCAMAAKLSSRLGSDK---VVVLEPEDKHYYQPMFTLIGGGMK-------------- 94

  Fly   205 GRLIFVCRE--DYLPYDRVKISKAMNLEIEQLRFRDEEFYKEYDIELWQGVAAEKLDTAQKELHC 267
             ||....|:  |.||      :||.                      |....|.:.|.....:..
  Fly    95 -RLDQSHRQMADVLP------TKAK----------------------WVKEKALEFDPDNNTVST 130

  Fly   268 SNGYVVKYDKIYLATGCSAFRPPIPGVNLENVRTVRELADTKAILASITPESRVV---------- 322
            |.|..:|||.:.:|||.......|||:                :.|..||:|.|.
  Fly   131 SGGKTIKYDFLIIATGLQLNYGKIPGL----------------VEALETPDSNVCSIYSPKYVDH 179

  Fly   323 ---CL-----GSSFIALE----AAAGLVSKVQSVT-----VVGRE-------NVPLKAAFGAE-I 362
               ||     |::.....    ..||...|:..::     .:||.       |..|...||.: .
  Fly   180 VYECLRRTNKGNAIFTFPNCPIKCAGAPQKIAYISEHYFRKMGRRDNVNIIYNTSLPVIFGVKHY 244

  Fly   363 GQRVLQLFEDNKVVMRMESGIAEIVGNEDGKVSEVVLVDDTRLPCDLLILGTGSKLNTQFLAKSG 427
            .:.:::|.:...:.:.::..:.|:...::     :.:.:|                    |||.|
  Fly   245 AEALMKLIKRRNITLNVQRNLVEVRHKDN-----IAVFED--------------------LAKPG 284

  Fly   428 VKVNRNGS-VDVTDFLESNVPDVYVGGDIANAHIHGLAHDRVNIGHYQLAQYHGRVAAINMCG-- 489
            |......| :.||.  ..:.|||     :||..........|::.  ||...|.:.:.:...|
  Fly   285 VHYEETYSMLHVTP--PMSTPDV-----VANCKKLVTPTGFVDVD--QLTLQHNKYSNVFAIGDS 340

  Fly   490 ----GVKKLEAVPFFFTLIFGKGIRYAGHGSYKDVIIDGSMEDFKFVAYFINEADTVTAVASCGR 550
                ..|...|......::| |.:..|..|.....|.||           .:....||..:||
  Fly   341 ASSPNSKTAAAAAAQSPVVF-KNVMAAIEGKAPTDIYDG-----------YSSCPIVTGYSSC-- 391

  Fly   551 DPIVAQF 557
              |:|:|
  Fly   392 --ILAEF 396

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4199	NP_569976.1	Rieske_AIFL_N	59..154	CDD:239560	18/74 (24%)
		NirB	182..578	CDD:440863	80/420 (19%)
Sqor	NP_647877.1	FadH2	65..387	CDD:440215	78/429 (18%)