DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4313 and Agtr1b

DIOPT Version :10

Sequence 1:NP_569971.3 Gene:CG4313 / 31169 FlyBaseID:FBgn0025632 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_112271.2 Gene:Agtr1b / 81638 RGDID:2071 Length:359 Species:Rattus norvegicus


Alignment Length:245 Identity:56/245 - (22%)
Similarity:108/245 - (44%) Gaps:49/245 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 MNLNLNVDD-------------RRQVLFEGYSDELLTIAWVACIVFIIVGVPGNLLTIVALSRGR 106
            |.||.:.:|             |...:|       :.|..:..|:| :||:.||.|.::.:....
  Rat     1 MTLNSSTEDGIKRIQDDCPKAGRHNYIF-------VMIPTLYSIIF-VVGIFGNSLVVIVIYFYM 57

  Fly   107 QTRNSTAIFIINLSCSDLLFGCFNLPL-AASTFKERAWTHSDLLCRL-FPMLRYGLLAVSLLSVS 169
            :.:...::|::||:.:||.| ...||| |..|..|..|...:.||:: ...:.:.|.| |:..::
  Rat    58 KLKTVASVFLLNLALADLCF-LLTLPLWAVYTAMEYRWPFGNHLCKIASASVSFNLYA-SVFLLT 120

  Fly   170 LITINRYIIIAHPRQYPRIYQRRYLALMVAGT-----WITTFSIMIPT--WRGVWGIFGLDVSIG 227
            .::|:||:.|.||.:     .|....::||..     |:......:|.  :|.|:.|...:::: 
  Rat   121 CLSIDRYLAIVHPMK-----SRLRRTMLVAKVTCIIIWLMAGLASLPAVIYRNVYFIENTNITV- 179

  Fly   228 SCSIMHDRYGRS-------PKEFLFIAAFMVPCICIVICYARIFLLVRKA 270
             |:..::....:       .|..|   .|:.|.:.|:..|..|:..::||
  Rat   180 -CAFHYESQNSTLPIGLGLTKNIL---GFVFPFLIILTSYTLIWKALKKA 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4313NP_569971.3 7tmA_GPR84-like 78..505 CDD:320338 50/209 (24%)
TM helix 1 79..105 CDD:320338 8/25 (32%)
TM helix 2 112..135 CDD:320338 9/23 (39%)
TM helix 3 150..180 CDD:320338 7/30 (23%)
TM helix 4 194..212 CDD:320338 3/22 (14%)
TM helix 5 237..262 CDD:320338 6/31 (19%)
TM helix 6 437..467 CDD:320338
TM helix 7 473..498 CDD:320338
Agtr1bNP_112271.2 TM helix 5 192..221 CDD:320320 7/31 (23%)
TM helix 6 233..263 CDD:320320
TM helix 7 281..306 CDD:320320
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 339..359
7tmA_AT1R 29..313 CDD:320320 50/210 (24%)
TM helix 1 30..56 CDD:320320 8/26 (31%)
TM helix 2 63..88 CDD:320320 10/25 (40%)
TM helix 3 101..131 CDD:320320 7/30 (23%)
TM helix 4 144..165 CDD:320320 4/20 (20%)
Blue background indicates that the domain is not in the aligned region.

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