DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4313 and aplnrb

DIOPT Version :10

Sequence 1:NP_569971.3 Gene:CG4313 / 31169 FlyBaseID:FBgn0025632 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_001025368.2 Gene:aplnrb / 565492 ZFINID:ZDB-GENE-050913-90 Length:359 Species:Danio rerio


Alignment Length:482 Identity:83/482 - (17%)
Similarity:150/482 - (31%) Gaps:197/482 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 VACIVFIIVGVPGNLLTIVALSRGRQTRNSTAIFIINLSCSDLLFGCFNLPL-AASTFKERAWTH 145
            |..::..|:|:.||.:.|..:.|.:..|.:..::|.||:.:||.| ...||| |..|.....|..
Zfish    39 VLYMLIFILGLTGNGVVIFTVWRAQSKRRAADVYIGNLALADLTF-VVTLPLWAVYTALGYHWPF 102

  Fly   146 SDLLCRLFPMLRYGLLAVSLLSVSLITINRYIIIAHPRQYPRIYQRRYLALMVAGTWITTFSIMI 210
            ...||::...:....:..|:..::.::::||:.|.|.....::..|.::...:...|:.:..:..
Zfish   103 GVALCKISSYVVLLNMYASVFCLTCLSLDRYMAIVHSLTSTQLRTRGHMRASLTAIWLLSGVLAA 167

  Fly   211 PTWRGVWGIFGLDVSIGSCSIMHDRYGRSP-KEFLFIA---------AFMVPCICIVICYARIFL 265
            ||......::.::.:..||::..:.....| :|..:||         .|::|.:.:::||     
Zfish   168 PTLLFRTTVYDVETNRTSCAMDFNLVVSQPGQETYWIAGLSISSTALGFLIPLLAMMVCY----- 227

  Fly   266 LVRKAAIRAGTAGKTNVSDVTPSSAPQHQIQAMATPKKPEKVTTSSGEANEPIAGRPFVVEENLA 330
                     |..|.|                          ||            |.|       
Zfish   228 ---------GFIGCT--------------------------VT------------RHF------- 238

  Fly   331 YIDDNASTDSLPISYSIRRRDQDQQPPPVDANVVLKEREKERDRDQEKVSLGRSQTQLEMGKTHG 395
                          .|:|:.||                                           
Zfish   239 --------------NSLRKEDQ------------------------------------------- 246

  Fly   396 KNPITTSLRTTSFTRFSPRKSHYASMGNTSNASSIYPGRMSAKDRRLLKMILVIFVWFVICYLPI 460
                                                      :.|||||:|..:.|.|..|::|.
Zfish   247 ------------------------------------------RKRRLLKIITTLVVVFAACWMPF 269

  Fly   461 TVAKIWKSATEVHWFNIA----------------GYLLIYLTTCINPLIYVLMSSEYRRAYWNLL 509
            .|.   |:...:.:.|:|                ...|.|:.:|:|||:|......:|.....||
Zfish   270 HVV---KTMDALSYLNLAPDSCTFLNLLLLAHPYATCLAYVNSCLNPLLYAFFDLRFRSQCLCLL 331

  Fly   510 R----CHGSP----DTQKQRNQANAKR 528
            .    .|.||    .:||...|:.|.:
Zfish   332 NLKKALHASPASSLSSQKTEAQSLATK 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4313NP_569971.3 7tmA_GPR84-like 78..505 CDD:320338 74/449 (16%)
TM helix 1 79..105 CDD:320338 6/22 (27%)
TM helix 2 112..135 CDD:320338 9/23 (39%)
TM helix 3 150..180 CDD:320338 4/29 (14%)
TM helix 4 194..212 CDD:320338 1/17 (6%)
TM helix 5 237..262 CDD:320338 8/34 (24%)
TM helix 6 437..467 CDD:320338 11/29 (38%)
TM helix 7 473..498 CDD:320338 9/40 (23%)
aplnrbNP_001025368.2 7tmA_Apelin_R 25..327 CDD:341340 74/449 (16%)
TM helix 1 36..62 CDD:341340 6/22 (27%)
TM helix 2 69..94 CDD:341340 10/25 (40%)
TM helix 3 107..137 CDD:341340 4/29 (14%)
TM helix 4 150..171 CDD:341340 3/20 (15%)
TM helix 5 204..233 CDD:341340 8/42 (19%)
TM helix 6 246..276 CDD:341340 13/117 (11%)
TM helix 7 295..320 CDD:341340 7/24 (29%)

Return to query results.
Submit another query.