DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4313 and Mtnr1b

DIOPT Version :10

Sequence 1:NP_569971.3 Gene:CG4313 / 31169 FlyBaseID:FBgn0025632 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_001380770.1 Gene:Mtnr1b / 192646 RGDID:620798 Length:364 Species:Rattus norvegicus


Alignment Length:470 Identity:86/470 - (18%)
Similarity:146/470 - (31%) Gaps:193/470 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 WVA------CIVFIIVGVPGNLLTIVALSRGRQTRNSTAIFIINLSCSDLLFGCFNLPLAASTFK 139
            |||      .||...|...||||.|:::.|.|:.||:..:|::||:.:||:...:..||......
  Rat    38 WVAPMLSTVVIVTTAVDFVGNLLVILSVLRNRKLRNAGNLFVVNLALADLVVALYPYPLILVAIL 102

  Fly   140 ERAWTHSDLLCR--LFPMLRYGLLAV-SLLSVSLITINRYIIIAHPRQYPRIYQRRYLALMVAGT 201
            ...|...::.|:  .|.|   ||..: |:.:::.|.||||..|.|...|.|...:.:..|.::..
  Rat   103 HDGWVLGEIHCKASAFVM---GLSVIGSVFNITAIAINRYWCICHSATYHRACSQWHAPLYISLI 164

  Fly   202 WITTFSIMIPTWRGVWGIFGLDVSIGSCSIMHDRYGRSPKEFLFIAA--FMVPCICIVICYARIF 264
            |:.|...::|.:  ..|....|..|.||:.:..   .|.:..:.:.|  |::|...:..||.||:
  Rat   165 WLLTLVALVPNF--FVGSLEYDPRIYSCTFIQT---ASTQYTMAVVAIHFLLPIAVVSFCYLRIW 224

  Fly   265 LLVRKAAIRAGTAGKTNVSDVTPSSAPQHQIQAMATPKKPEKVTTSSGEANEPIAGRPFVVEENL 329
            :||                           :||....|...|:                      
  Rat   225 ILV---------------------------LQARRKAKAERKL---------------------- 240

  Fly   330 AYIDDNASTDSLPISYSIRRRDQDQQPPPVDANVVLKEREKERDRDQEKVSLGRSQTQLEMGKTH 394
                                                                             
  Rat   241 ----------------------------------------------------------------- 240

  Fly   395 GKNPITTSLRTTSFTRFSPRKSHYASMGNTSNASSIYPGRMSAKDRRLLKMILVIFVWFVICYLP 459
                                                   |:...|.|....:..:||.|.||:.|
  Rat   241 ---------------------------------------RLRPSDLRSFLTMFAVFVVFAICWAP 266

  Fly   460 ITVAKIWKS------ATEV-HWFNIAGYLLIYLTTCINPLIYVLMSSEYRRAYWNLL-------- 509
            :....:..:      |.:: ....:..|.|.|..:|:|.::|.|::..:||.|..:|        
  Rat   267 LNCIGLAVAINPEAMALQIPEGLFVTSYFLAYFNSCLNAIVYGLLNQNFRREYKRILSALWSTGR 331

  Fly   510 ------RCHGSPDTQ 518
                  :||.:.|.|
  Rat   332 CFHDASKCHLTEDLQ 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4313NP_569971.3 7tmA_GPR84-like 78..505 CDD:320338 80/441 (18%)
TM helix 1 79..105 CDD:320338 11/29 (38%)
TM helix 2 112..135 CDD:320338 7/22 (32%)
TM helix 3 150..180 CDD:320338 11/32 (34%)
TM helix 4 194..212 CDD:320338 3/17 (18%)
TM helix 5 237..262 CDD:320338 6/26 (23%)
TM helix 6 437..467 CDD:320338 8/29 (28%)
TM helix 7 473..498 CDD:320338 7/24 (29%)
Mtnr1bNP_001380770.1 7tm_GPCRs 41..319 CDD:475119 77/438 (18%)
TM helix 1 43..67 CDD:410628 8/23 (35%)
TM helix 2 76..98 CDD:410628 7/21 (33%)
TM helix 3 114..136 CDD:410628 6/24 (25%)
TM helix 4 159..175 CDD:410628 3/15 (20%)
TM helix 5 198..221 CDD:410628 4/22 (18%)
TM helix 6 250..272 CDD:410628 6/21 (29%)
TM helix 7 287..312 CDD:410628 7/24 (29%)

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