DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4313 and mchr1

DIOPT Version :10

Sequence 1:NP_569971.3 Gene:CG4313 / 31169 FlyBaseID:FBgn0025632 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_001297042.1 Gene:mchr1 / 100494736 XenbaseID:XB-GENE-1018311 Length:374 Species:Xenopus tropicalis


Alignment Length:285 Identity:67/285 - (23%)
Similarity:115/285 - (40%) Gaps:35/285 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 LFEGYSDELLTIAWVACIVFIIVGVPGNLLTIVALS-RGRQTRNSTAIFIINLSCSDLLFGCFNL 131
            :|.|..|....:..|...:..:||:.||.:.|..:: :.:...|...|||::||.:|||| ...:
 Frog    29 VFSGRQDHSSVVLPVIFGIICLVGIIGNCIVIYTINKKPKGNHNIADIFIVSLSVTDLLF-LLGM 92

  Fly   132 P-LAASTFKERAWTHSDLLCRLFPMLRYGLLAVSLLSVSLITINRYIIIAHPRQYPRIYQRRYLA 195
            | |.........|.....:|.:...|.......|...::.::::||:...||.:...:......|
 Frog    93 PFLIHQLLGNGVWHFGATMCTIITALDANSQFASTYILTAMSVDRYLATVHPIRSSYMRTTCAAA 157

  Fly   196 LMVAGTWITTFSIMIPTWRGVWGIFGLDVSIGSCSIM-----HDRYGRSPKEFLFIAAFMVPCIC 255
            |::....:.:...:||.:.....|...|.:.| |.|:     .|.|..:  .:.|..||::|.:.
 Frog   158 LVILLLCLCSLITIIPVFMYTQLIEHPDGNAG-CGIILPNFSIDIYWYT--LYQFFLAFVIPLLI 219

  Fly   256 IVICYARI-------FLLVRKAAIRAGTAGKTNVSDVTPSS------APQHQIQ----AMATPK- 302
            |.:.|.:|       .:.:.:...||.:...|..| ||..|      ||.:.:|    .:..|. 
 Frog   220 ICVVYIKIQKHISCVVVPLPQRNFRARSKKITRTS-VTICSAFFICWAPYYILQLVHLKVTNPTV 283

  Fly   303 ---KPEKVTTSSGEANEPIAGRPFV 324
               ...||..|.|.||..|  .||:
 Frog   284 VFFYAYKVAISLGYANSCI--NPFI 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4313NP_569971.3 7tmA_GPR84-like 78..505 CDD:320338 64/275 (23%)
TM helix 1 79..105 CDD:320338 6/26 (23%)
TM helix 2 112..135 CDD:320338 11/23 (48%)
TM helix 3 150..180 CDD:320338 5/29 (17%)
TM helix 4 194..212 CDD:320338 3/17 (18%)
TM helix 5 237..262 CDD:320338 6/24 (25%)
TM helix 6 437..467 CDD:320338
TM helix 7 473..498 CDD:320338
mchr1NP_001297042.1 7tm_GPCRs 39..318 CDD:475119 64/275 (23%)
TM helix 1 41..65 CDD:410628 6/23 (26%)
TM helix 2 75..96 CDD:410628 10/21 (48%)
TM helix 3 113..135 CDD:410628 2/21 (10%)
TM helix 4 158..174 CDD:410628 2/15 (13%)
TM helix 5 202..225 CDD:410628 6/24 (25%)
TM helix 6 251..273 CDD:410628 7/22 (32%)
TM helix 7 286..311 CDD:410628 9/23 (39%)
Blue background indicates that the domain is not in the aligned region.

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