DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4313 and gpr84

DIOPT Version :10

Sequence 1:NP_569971.3 Gene:CG4313 / 31169 FlyBaseID:FBgn0025632 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_001099167.2 Gene:gpr84 / 100126017 ZFINID:ZDB-GENE-070928-33 Length:402 Species:Danio rerio


Alignment Length:441 Identity:98/441 - (22%)
Similarity:170/441 - (38%) Gaps:113/441 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 IVGVPGNLLTIVALSRGRQTRNSTAIFIINLSCSDLLFGCFNLPLAASTFKERAWTHSDLLCRLF 153
            |||..||:||::|.......|....:.|:||:.:|||:.....|::..::....|......||:|
Zfish    36 IVGTIGNILTVLAFVTDANLRTRFNVLIVNLAFADLLYCTILQPVSVDSYLHLHWRGGATWCRMF 100

  Fly   154 PMLRYGLLAVSLLSVSLITINRYIIIAHPRQ--YPRIYQRRYLALMVAGTWITTFSIMIPTWRGV 216
            .:|.:...:||::::.||.::||:::||...  ...:..:|.:|.::..:|:...:...|    :
Zfish   101 GLLLFLSNSVSIITLCLIAMSRYLVVAHRTSSCARLLLSQRGVAALLISSWVLGLASFAP----L 161

  Fly   217 WGIFGLDVSIGSCSIMHDRYGRSPKEFLFIAAFMVPCICIVICYARIFLLVRKAAIRAGTAGKTN 281
            |.::.....:.:|| .|...||.....|....|.:....:.:.|   ||:.||.:          
Zfish   162 WPVYVFAPQVCTCS-FHRTKGRPYTTVLLFLYFFLGLGFVGLFY---FLIYRKVS---------- 212

  Fly   282 VSDVTPSSAPQHQIQAMATPKKPEKVTTSSGEANEPIAGRPFVVEENLAYIDDNASTDSLPISYS 346
                                                :|.:.|                   :.|.
Zfish   213 ------------------------------------VAAKAF-------------------LKYR 222

  Fly   347 IRRRDQDQQPPPVDANVVLKEREKERDRDQEKVSLGRSQTQL-------EMGKTHGKNPITTSLR 404
            ..||...:           |:.|.|...|...:|.|.|.||.       .:.:.|||........
Zfish   223 PSRRSSKR-----------KQAEAEGTTDDSGISAGASTTQSCEISSDGAVAEQHGKQAQEGQTT 276

  Fly   405 TTSFTRFSPRKSHYASMGNTSNASSIY-----PGRMSAKD---RRLLKMILVIFVWFVICYLP-- 459
            |.:.|:       :||...||.||.:.     ....|.:|   :|:.:|...:|:.||.|:.|  
Zfish   277 TQNATQ-------HASSETTSKASPVVIQNTPAAANSGEDNEFKRVTRMCFTVFLCFVGCFAPFL 334

  Fly   460 -ITVAKIWKSATEVHWFNIAGYLLIYLTTCINPLIYVLMSSEYRRAYWNLL 509
             :.||.....|.:|.....|.  |.:|.:|||||:|..|:.::.:||.:||
Zfish   335 LLNVADKKNRAPQVIHMICAN--LTWLNSCINPLLYAAMNRQFNQAYKDLL 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4313NP_569971.3 7tmA_GPR84-like 78..505 CDD:320338 94/435 (22%)
TM helix 1 79..105 CDD:320338 8/15 (53%)
TM helix 2 112..135 CDD:320338 7/22 (32%)
TM helix 3 150..180 CDD:320338 10/29 (34%)
TM helix 4 194..212 CDD:320338 2/17 (12%)
TM helix 5 237..262 CDD:320338 5/24 (21%)
TM helix 6 437..467 CDD:320338 10/35 (29%)
TM helix 7 473..498 CDD:320338 9/24 (38%)
gpr84NP_001099167.2 7tmA_GPR84-like 25..379 CDD:320338 94/435 (22%)
TM helix 1 26..52 CDD:320338 8/15 (53%)
TM helix 2 59..82 CDD:320338 7/22 (32%)
TM helix 3 97..127 CDD:320338 10/29 (34%)
TM helix 4 143..161 CDD:320338 3/21 (14%)
TM helix 5 181..206 CDD:320338 5/27 (19%)
TM helix 6 310..340 CDD:320338 8/29 (28%)
TM helix 7 347..372 CDD:320338 10/26 (38%)

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