Protein Alignment Rbcn-3B and TEX1

DIOPT Version :10

• Sequence 1: NP_569960.2
• Gene: Rbcn-3B / 31155
• FlyBaseID: FBgn0023510
• Length: 1525
• Species: Drosophila melanogaster
• Sequence 2: NP_014146.1
• Gene: TEX1 / 855468
• SGDID: S000005197
• Length: 422
• Species: Saccharomyces cerevisiae
• Alignment Length: 210
• Identity: 49/210 - (23%)
• Similarity: 73/210 - (34%)
• Gaps: 69/210 - (32%)

  Fly  1332 INT----PLTQSVLHKAKGEILQCVEMLIDKMQSEIAGLLVEVMDIALHCVDGNELKNRGLAELC 1392
            :||    ||...:|...|.|.:...:  :.|..|.:..|  .:.||:....|           :.
Yeast   163 VNTCLYDPLGNWLLAATKSEKIYLFD--VKKDHSSVCSL--NISDISQEDND-----------VV 212

  Fly  1393 PAICKFNQISHCAQTRRIAVGANSGNLAIYELRQ---NKCQMIPAHTHPITSLAFSPDGKYLVSY 1454
            .::...|..||      |.:|..||.|||.:.:.   ..|..|.|||.|||.:...|.|:..::.
Yeast   213 YSLAWSNGGSH------IFIGFKSGYLAILKAKHGILEVCTKIKAHTGPITEIKMDPWGRNFITG 271

  Fly  1455 S-------------CAE---NRLSFWQTSTGMFGLGQSQTRCTK--------------------- 1482
            |             |.|   |.|:...|:..:..||:....||:
Yeast   272 SIDGNCYVWNMKSLCCELIINDLNSAVTTLDVCHLGKILGICTEDEMVYFYDLNSGNLLHSKSLA 336

  Fly  1483 GYSTAPI----PDVS 1493
            .|.|.|:    ||.|
Yeast   337 NYKTDPVLKFYPDKS 351

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbcn-3B	NP_569960.2	WD40 repeat	20..63	CDD:293791
		WD40	<22..202	CDD:475233
		WD40 repeat	68..107	CDD:293791
		WD40 repeat	118..152	CDD:293791
		WD40 repeat	160..204	CDD:293791
		WD40 repeat	212..251	CDD:293791
		WD40 repeat	406..459	CDD:293791
		WD40	453..>597	CDD:475233
		WD40 repeat	513..555	CDD:293791
		WD40 repeat	560..596	CDD:293791
		GvpP	<735..816	CDD:444004
		WD40	<1408..>1469	CDD:441893	23/79 (29%)
		WD40 repeat	1439..1466	CDD:293791	9/42 (21%)
TEX1	NP_014146.1	WD40	<63..331	CDD:441893	43/188 (23%)
		WD40 repeat	66..109	CDD:293791
		WD40 repeat	116..158	CDD:293791
		WD40 repeat	163..205	CDD:293791	11/45 (24%)
		WD40 repeat	213..249	CDD:293791	11/41 (27%)
		WD40 repeat	256..290	CDD:293791	7/33 (21%)
		WD40 repeat	298..336	CDD:293791	5/37 (14%)