| Sequence 1: | NP_569960.2 | Gene: | Rbcn-3B / 31155 | FlyBaseID: | FBgn0023510 | Length: | 1525 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001366327.1 | Gene: | Wdsub1 / 72137 | MGIID: | 1919387 | Length: | 475 | Species: | Mus musculus |
| Alignment Length: | 193 | Identity: | 41/193 - (21%) |
|---|---|---|---|
| Similarity: | 62/193 - (32%) | Gaps: | 77/193 - (39%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 11 TMCTPVAETNYQP--SDPAPFDTF-------CTRETS----------TTTATESTTVSTPTTATS 56
Fly 57 STPELSSSNSPSTETTTCA------------SPTTSTNGHLTSTT-----------------DGA 92
Fly 93 ATS----------PIKTETPKH--------QICFTPNQATFSRN-----------STLIQGTC 126 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Rbcn-3B | NP_569960.2 | WD40 repeat | 20..63 | CDD:293791 | 16/61 (26%) |
| WD40 | <22..202 | CDD:475233 | 36/182 (20%) | ||
| WD40 repeat | 68..107 | CDD:293791 | 13/85 (15%) | ||
| WD40 repeat | 118..152 | CDD:293791 | 3/20 (15%) | ||
| WD40 repeat | 160..204 | CDD:293791 | |||
| WD40 repeat | 212..251 | CDD:293791 | |||
| WD40 repeat | 406..459 | CDD:293791 | |||
| WD40 | 453..>597 | CDD:475233 | |||
| WD40 repeat | 513..555 | CDD:293791 | |||
| WD40 repeat | 560..596 | CDD:293791 | |||
| GvpP | <735..816 | CDD:444004 | |||
| WD40 | <1408..>1469 | CDD:441893 | |||
| WD40 repeat | 1439..1466 | CDD:293791 | |||
| Wdsub1 | NP_001366327.1 | WD40 | <3..310 | CDD:441893 | |
| WD 1 | 10..47 | ||||
| WD40 repeat | 16..52 | CDD:293791 | |||
| WD 2 | 52..91 | ||||
| WD40 repeat | 57..93 | CDD:293791 | |||
| WD 3 | 95..134 | ||||
| WD40 repeat | 101..136 | CDD:293791 | |||
| WD 4 | 137..176 | ||||
| WD40 repeat | 143..177 | CDD:293791 | |||
| WD 5 | 178..227 | ||||
| WD40 repeat | 183..235 | CDD:293791 | |||
| WD 6 | 236..275 | ||||
| WD40 repeat | 241..264 | CDD:293791 | |||
| WD40 repeat | 283..307 | CDD:293791 | |||
| SAM_WDSUB1 | 327..398 | CDD:188904 | |||
| U-box | 403..475 | CDD:398320 | 4/9 (44%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||