| Sequence 1: | NP_001284797.1 | Gene: | Rbcn-3B / 31155 | FlyBaseID: | FBgn0023510 | Length: | 1525 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001366327.1 | Gene: | Wdsub1 / 72137 | MGIID: | 1919387 | Length: | 475 | Species: | Mus musculus |
| Alignment Length: | 513 | Identity: | 100/513 - (19%) |
|---|---|---|---|
| Similarity: | 168/513 - (32%) | Gaps: | 168/513 - (32%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 457 LYGHRGRVNCLLCPSMIHSRYEKSHLLSGGIDFAVCLWDL-------YSGSLLHRFCVH------ 508
Fly 509 AGEITQLLVPPESCSPRILKCICSVASDHSVTLVSLQERKCVTLASRHLFPVVTIKWRPLDDFLI 573
Fly 574 VGCSDGSVYVWQMETGHLDRVLHGMLAEEVLSACDEQAEDGG---SGGGGGS-----------NG 624
Fly 625 ASASEMGM-----ANPAVHFFRGLKSRNMNA-------------IRHATQRGITQLQQLQGHNQG 671
Fly 672 NFDFLMKHRSNPL---------VIQG----------------------------LRTNPKDAESH 699
Fly 700 ILFFDIE-----GLI---FELHSEEYAQ------MTPATLESL-GVHLQNPKDGKS-MHLDASKK 748
Fly 749 IGDFFNKVKNKAVDVEKILKDKDKHGLVQKFKEKTEIVEKKVQAKVESLQKAVEPHE-------- 805
Fly 806 --------------EQQDLKSKIASKMEVTHVMEVAQLLLSLLHSWGLDPHLDKMCET 849 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Rbcn-3B | NP_001284797.1 | WD40 | <11..>204 | CDD:225201 | |
| WD40 repeat | 20..63 | CDD:293791 | |||
| WD40 | <22..202 | CDD:295369 | |||
| WD40 repeat | 68..107 | CDD:293791 | |||
| WD40 repeat | 118..152 | CDD:293791 | |||
| WD40 repeat | 160..204 | CDD:293791 | |||
| WD40 repeat | 212..251 | CDD:293791 | |||
| WD40 repeat | 406..459 | CDD:293791 | 1/1 (100%) | ||
| WD40 | <449..>607 | CDD:225201 | 36/162 (22%) | ||
| WD40 | 453..>597 | CDD:295369 | 34/152 (22%) | ||
| WD40 repeat | 513..555 | CDD:293791 | 7/41 (17%) | ||
| WD40 repeat | 560..596 | CDD:293791 | 11/35 (31%) | ||
| WD40 | <1395..>1469 | CDD:225201 | |||
| WD40 | <1399..1495 | CDD:295369 | |||
| WD40 repeat | 1439..1466 | CDD:293791 | |||
| Wdsub1 | NP_001366327.1 | WD40 | 4..308 | CDD:238121 | 61/326 (19%) |
| WD 1 | 10..47 | 8/44 (18%) | |||
| WD40 repeat | 16..52 | CDD:293791 | 8/43 (19%) | ||
| WD 2 | 52..91 | 10/44 (23%) | |||
| WD40 repeat | 57..93 | CDD:293791 | 10/41 (24%) | ||
| WD 3 | 95..134 | 11/48 (23%) | |||
| WD40 repeat | 101..136 | CDD:293791 | 10/36 (28%) | ||
| WD 4 | 137..176 | 9/39 (23%) | |||
| WD40 repeat | 143..177 | CDD:293791 | 8/34 (24%) | ||
| WD 5 | 178..227 | 6/48 (13%) | |||
| WD40 repeat | 183..235 | CDD:293791 | 4/51 (8%) | ||
| WD 6 | 236..275 | 6/38 (16%) | |||
| WD40 repeat | 241..264 | CDD:293791 | 2/22 (9%) | ||
| WD40 repeat | 283..307 | CDD:293791 | 3/23 (13%) | ||
| SAM_WDSUB1 | 327..398 | CDD:188904 | 21/90 (23%) | ||
| U-box | 403..475 | CDD:398320 | 12/71 (17%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG4155 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.900 | |||||