DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rbcn-3B and TEP1

DIOPT Version :10

Sequence 1:NP_569960.2 Gene:Rbcn-3B / 31155 FlyBaseID:FBgn0023510 Length:1525 Species:Drosophila melanogaster
Sequence 2:NP_009041.2 Gene:TEP1 / 7011 HGNCID:11726 Length:2627 Species:Homo sapiens


Alignment Length:918 Identity:169/918 - (18%)
Similarity:262/918 - (28%) Gaps:362/918 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 VFLSDDQFTLVTGCYDGQICLWQVEPTTLKMSPRCLLVGHSAPVLCLVRASLLPENNFLVSSSEN 89
            :|||||  ||....:||.:.||.::       ..|.::...|....:....|.|:...|.:....
Human  1725 LFLSDD--TLFLTAFDGLLELWDLQ-------HGCRVLQTKAHQYQITGCCLSPDCRLLATVCLG 1780

  Fly    90 GEMCTWDLTDGKCMEAVKLPQVHTQIQSYHTANSEDVRLFCIGYYAEIMVMD----PFSLEVIYV 150
            |.:..||...|      :|...||..:|          |.|:.::.|..|:.    ..|:....|
Human  1781 GCLKLWDTVRG------QLAFQHTYPKS----------LNCVAFHPEGQVIATGSWAGSISFFQV 1829

  Fly   151 LSSKVKPDWISAIHVLRPMRRKDDVVLAITTTG----------TVKVWTLTGNENKHAEPIYENE 205
            ...||..|..:....:|        .||....|          .|::|.........|.|.:...
Human  1830 DGLKVTKDLGAPGASIR--------TLAFNVPGGVVAVGRLDSMVELWAWREGARLAAFPAHHGF 1886

  Fly   206 SKEIRCLNAITMNCCAQNQRTVLLVCTKYWQIYDAGDFTVLCSVIAPARERWQGGDFITSDRVML 270
            ......|:|   .|                |:..||:                      ..:|.:
Human  1887 VAAALFLHA---GC----------------QLLTAGE----------------------DGKVQV 1910

  Fly   271 WT---DEGKGYLYKLPANCIPDNKEFHSKSVVRDAPYLYYVLQHAGDKV--------LSCPPAMK 324
            |:   ...:|:|..|..                 :|.|...|...||:|        :.......
Human  1911 WSGSLGRPRGHLGSLSL-----------------SPALSVALSPDGDRVAVGYRADGIRIYKISS 1958

  Fly   325 LLQGAGGQ--------------HNLLRGDSEGYISVWNVPEVPLDNISILQAKQMPPRPLKPHVC 375
            ..|||.||              ..|:.|..:|.:..|.:.|..|.::                  
Human  1959 GSQGAQGQALDVAVSALAWLSPKVLVSGAEDGSLQGWALKECSLQSL------------------ 2005

  Fly   376 TSLVEAWSIMDPPPVGILDQLSRITESPVKLTSSIYLPQQSRLVIGREDGSIVIVPATQTVMMQL 440
                  |            .|||..:..:.|.:|     |..|....||.::.:.|      .||
Human  2006 ------W------------LLSRFQKPVLGLATS-----QELLASASEDFTVQLWP------RQL 2041

  Fly   441 LVGIKQNFSDWPSHQILYGHRGRVNC------------------LLC--------PSMIHS---- 475
            |.. .....|:|....|.||.|.|:|                  |||        |.:|||    
Human  2042 LTR-PHKAEDFPCGTELRGHEGPVSCCSFSTDGGSLATGGRDRSLLCWDVRTPKTPVLIHSFPAC 2105

  Fly   476 --------RYEKSHLL-SGGIDFAVCLWDLYSGSLLHRFCVHAGEITQLL--------------- 516
                    .:.|.:|| |...|.:|.|||..||..|.:|..|...::.:.               
Human  2106 HRDWVTGCAWTKDNLLISCSSDGSVGLWDPESGQRLGQFLGHQSAVSAVAAVEEHVVSVSRDGTL 2170

  Fly   517 ------------VPPES-----CS----PR-------------------------ILKC------ 529
                        :|..|     |:    ||                         :|.|      
Human  2171 KVWDHQGVELTSIPAHSGPISHCAAAMEPRAAGQPGSELLVVTVGLDGATRLWHPLLVCQTHTLL 2235

  Fly   530 -----------------ICSVASDHSVTLVSLQERKCVTLASRHLFPVVTIKWRPLDDFLIVGCS 577
                             :.:.:.|.||.|..:.:....|...|....|..:.|.|.....:.|..
Human  2236 GHSGPVRAAAVSETSGLMLTASEDGSVRLWQVPKEADDTCIPRSSAAVTAVAWAPDGSMAVSGNQ 2300

  Fly   578 DGSVYVWQ--------METGHLDRVLHG-------MLAEEVLSACDEQAEDGGSGGGGGSNGASA 627
            .|.:.:||        ...||:..::..       :.|:|.:|....:...|.:.|         
Human  2301 AGELILWQEAKAVATAQAPGHIGALIWSSAHTFFVLSADEKISEWQVKLRKGSAPG--------- 2356

  Fly   628 SEMGMANPAVHFFRGLKSRNMNAIRHATQRGITQLQQLQGHNQGNFDFLMKHRSNPLVIQGLRTN 692
                  |.::|..|.|            |..:..|..|.....|:|..|.|.....|.::     
Human  2357 ------NLSLHLNRIL------------QEDLGVLTSLDWAPDGHFLILAKADLKLLCMK----- 2398

  Fly   693 PKDAESHILFFDIEG-LIFELHSEEYAQMTPATLESLGVHLQNPKDGKSMHLDASKKIGDFFNKV 756
            |.||.|.|.....|. :|...|.|            .|:.:..|||...:.....|:.|:|..::
Human  2399 PGDAPSEIWSSYTENPMILSTHKE------------YGIFVLQPKDPGVLSFLRQKESGEFEERL 2451

  Fly   757 KNKAVDVE 764
             |..:::|
Human  2452 -NFDINLE 2458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rbcn-3BNP_569960.2 WD40 repeat 20..63 CDD:293791 12/37 (32%)
WD40 <22..202 CDD:475233 41/190 (22%)
WD40 repeat 68..107 CDD:293791 7/38 (18%)
WD40 repeat 118..152 CDD:293791 6/37 (16%)
WD40 repeat 160..204 CDD:293791 8/53 (15%)
WD40 repeat 212..251 CDD:293791 6/38 (16%)
WD40 repeat 406..459 CDD:293791 13/52 (25%)
WD40 453..>597 CDD:475233 49/274 (18%)
WD40 repeat 513..555 CDD:293791 12/125 (10%)
WD40 repeat 560..596 CDD:293791 9/43 (21%)
GvpP <735..816 CDD:444004 8/30 (27%)
WD40 <1408..>1469 CDD:441893
WD40 repeat 1439..1466 CDD:293791
TEP1NP_009041.2 TEP1 N-terminal 1 1..30
TEP1_N 1..29 CDD:428450
TEP1 N-terminal 2 31..60
TEP1_N 31..59 CDD:428450
TEP1 N-terminal 3 61..90
TEP1_N 61..89 CDD:428450
TEP1 N-terminal 4 91..120
TEP1_N 91..119 CDD:428450
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 193..214
TROVE 226..676 CDD:461724
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 383..402
DUF5920 687..889 CDD:466045
DUF4062 900..1008 CDD:463823
NACHT 1162..1337 CDD:428606
WD 1 1411..1448
WD 2 1674..1713
WD40 <1680..1958 CDD:441893 58/323 (18%)
WD40 repeat 1680..1716 CDD:293791
WD 3 1716..1754 12/37 (32%)
WD40 repeat 1722..1757 CDD:293791 12/40 (30%)
WD 4 1757..1796 9/44 (20%)
WD40 repeat 1762..1801 CDD:293791 10/44 (23%)
WD 5 1798..1837 10/48 (21%)
WD40 repeat 1804..1840 CDD:293791 8/35 (23%)
WD 6 1840..1879 6/46 (13%)
WD40 repeat 1845..1881 CDD:293791 7/43 (16%)
WD40 1849..2268 CDD:441893 88/524 (17%)
WD 7 1882..1921 8/79 (10%)
WD40 repeat 1888..1923 CDD:293791 9/75 (12%)
WD 8 1925..1964 9/55 (16%)
WD 9 1967..2005 6/37 (16%)
WD40 repeat 1972..2013 CDD:293791 10/76 (13%)
WD 10 2008..2047 13/50 (26%)
WD40 repeat 2016..2059 CDD:293791 13/54 (24%)
WD 11 2059..2098 9/38 (24%)
WD40 repeat 2064..2103 CDD:293791 9/38 (24%)
WD 12 2105..2143 12/37 (32%)
WD40 repeat 2111..2145 CDD:293791 12/33 (36%)
WD 13 2146..2183 1/36 (3%)
WD40 repeat 2151..2235 CDD:293791 7/83 (8%)
WD 14 2185..2233 6/47 (13%)
WD40 2231..>2391 CDD:475233 31/186 (17%)
WD 15 2236..2275 4/38 (11%)
WD40 repeat 2241..2280 CDD:293791 6/38 (16%)
WD 16 2278..2317 8/38 (21%)
WD40 repeat 2283..2307 CDD:293791 5/23 (22%)
WD 17 2319..2355 6/35 (17%)
WD40 repeat 2326..2359 CDD:293791 6/47 (13%)
WD 18 2368..2417 13/53 (25%)
WD40 repeat 2372..2418 CDD:293791 14/50 (28%)
WD 19 2459..2500 169/918 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2506..2551
WD 20 2553..2590
WD 21 2592..2626
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.