DRSC/TRiP Functional Genomics Resources

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Protein Alignment Edem1 and MNL1

DIOPT Version :10

Sequence 1:NP_001259152.1 Gene:Edem1 / 31154 FlyBaseID:FBgn0023511 Length:1004 Species:Drosophila melanogaster
Sequence 2:NP_012074.3 Gene:MNL1 / 856611 SGDID:S000001247 Length:796 Species:Saccharomyces cerevisiae


Alignment Length:606 Identity:197/606 - (32%)
Similarity:300/606 - (49%) Gaps:118/606 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LICA--VLLVLL---------STGVSGQKQYSKARKLELREDVRRMFQHAYDGYLRHASNYDELR 67
            ::|.  |||.||         ....|...:..||.|.|::|    :|...:|.||.|...|||::
Yeast     1 MVCCLWVLLALLLHLDHVACEDDAYSFTSKELKAYKQEVKE----LFYFGFDNYLEHGYPYDEVK 61

  Fly    68 PLTC-------------DGHDTWGSYSLTLIDALDTLATMGNFTEFRRAARLLEEKM---DFDRD 116
            |::|             ..:|..|::::||||:|.|:|.:.:..:|.:|.||:|...   :||.|
Yeast    62 PISCVPKKRNFEDPTDQGTNDILGNFTITLIDSLTTIAILEDRPQFLKAVRLVERTFPDGNFDID 126

  Fly   117 INVSVFETNIRIVGGLLSAHLLSKRAGVELEPGWPCKGPLLRLAEDVARRLLPAFVTNTGMPYGT 181
            ..:.|||..||::|.|||:||.:......:..|....|.|||||:::|.|||||::|:||:|...
Yeast   127 STIQVFEITIRVIGSLLSSHLYATDPTKAVYLGDDYDGSLLRLAQNMADRLLPAYLTSTGLPMPR 191

  Fly   182 VNL--RYGV---PKGETSITCTAGVGTFLIEFGTLSRLTGKTIYEDVAMKAVHALWAYRSPIGLF 241
            .|:  ::.|   |:...:....|.:.:.:.||..||.|||...||.|...|....|:.|:.:.|.
Yeast   192 RNIKRKWDVSEFPEFLETENNVAAMASPMFEFTILSYLTGDPKYEKVTRYAFDKTWSLRTGLDLL 256

  Fly   242 GNHIDVQS-GRWTALDSGIGAGVDSLFEYLVKASVLLNRPELLELFHEARAAIDKYMRKEDW-YV 304
            ......:. ..:|.: :||||.:||||||.:|.::|.:..||:|:::.|..|: |...|.|| :.
Yeast   257 PMSFHPEKLTPYTPM-TGIGASIDSLFEYALKGAILFDDSELMEVWNVAYEAL-KTNCKNDWFFA 319

  Fly   305 WVGMNKGRVTLPVFQSLEAFWPGILSIIGDTEPALRTISRYIGVWKKYGFLPEFYNIAAGEASP- 368
            .|..:.|.:.:|...||.||:.|:..:.||.:.|:.....::.:|..:|.:||.:|.:..|..| 
Yeast   320 NVMADTGHLFVPWIDSLSAFFSGLQVLAGDLDDAIANHLMFLKMWNTFGGIPERWNFSPPEFPPL 384

  Fly   369 ---------------NREVYPLRPELIESAMYLYRATGNEYLLEFGEHMLETLEFSAKTKCGYAT 418
                           ..|.||||||..||..:|||||.:.:.|..|.|:|:.|:...|:.||:|.
Yeast   385 SPLERSGAVALDNILPLEWYPLRPEFFESTYFLYRATKDPFYLNIGVHLLKDLKQRFKSNCGFAG 449

  Fly   419 IRNVVTHEKENRMESFFLAETSKYLYLLFDEENFLHNDGSGGELLSTEDDVCVVQAGAYIFNTEA 483
            .:||:|.|.::|||:|.|:||.|||||||||||.|||..|         ||        ||:|||
Yeast   450 FQNVITGELQDRMETFVLSETLKYLYLLFDEENELHNSAS---------DV--------IFSTEA 497

  Fly   484 HPMDMSALHCCHAHNEDIYTSLDLQRFSPRAILERSKKRQVAVQEQWVPQCHPENNEFFNKEDES 548
            |||                                           |:||....|.:...|.:.|
Yeast   498 HPM-------------------------------------------WLPQEVRSNYKRNAKFNNS 519

  Fly   549 VQAQDSE--KEQEREQSGTST 567
            |.:...|  ::::|||:|.:|
Yeast   520 VYSSHLEICQKKDREQAGENT 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Edem1NP_001259152.1 Glyco_hydro_47 48..486 CDD:460241 170/476 (36%)
MNL1NP_012074.3 Glyco_hydro_47 42..502 CDD:460241 172/521 (33%)
BRCT <557..594 CDD:469589
Blue background indicates that the domain is not in the aligned region.

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