DRSC/TRiP Functional Genomics Resources

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Protein Alignment Edem1 and AT5G43710

DIOPT Version :10

Sequence 1:NP_001259152.1 Gene:Edem1 / 31154 FlyBaseID:FBgn0023511 Length:1004 Species:Drosophila melanogaster
Sequence 2:NP_199184.1 Gene:AT5G43710 / 834391 AraportID:AT5G43710 Length:624 Species:Arabidopsis thaliana


Alignment Length:696 Identity:262/696 - (37%)
Similarity:367/696 - (52%) Gaps:110/696 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LICAVLLVL------LSTGVSGQKQYSKARKLELREDVRRMFQHAYDGYLRHASNYDELRPLTCD 72
            |:.|:|:.|      |..||..:.......| :||::||.||.||:|||:.:|...||||||:|.
plant     8 LLFAILISLTFSGFVLHHGVLAESVKPDEAK-QLRDEVRGMFYHAFDGYMNNAFPLDELRPLSCQ 71

  Fly    73 GHDTWGSYSLTLIDALDTLATMGNFTEFRRAARLLEEKMDFDRDINVSVFETNIRIVGGLLSAHL 137
            |.||.|.|:|||||:|||||.:|:...|..:...:.:.:.|:.:..||||||.||::||||||||
plant    72 GEDTLGGYALTLIDSLDTLALLGDRERFTSSVEWIGKNLQFNINKTVSVFETTIRVLGGLLSAHL 136

  Fly   138 LSK--RAGVELEPGWPCKGPLLRLAEDVARRLLPAFVTNTGMPYGTVNLRYGVPKGETSITCTAG 200
            ::.  ..|:.: |.:  ...||.|||::|||:||||.|.||:|:|:|||.|||.|.|:.||.|||
plant   137 IASDYATGMRI-PSY--NNELLVLAENLARRMLPAFDTPTGIPFGSVNLMYGVDKHESKITSTAG 198

  Fly   201 VGTFLIEFGTLSRLTGKTIYEDVAMKAVHALWAYRSPIGLFGNHIDVQSGRWTALDSGIGAGVDS 265
            .||..:|||.|||||...::|.||..||..|||.||.:.|.|.||:|.:|.||..|:|||..:||
plant   199 GGTLSLEFGVLSRLTNDPVFEQVAKNAVRGLWARRSNLDLVGAHINVFTGEWTQKDAGIGTSIDS 263

  Fly   266 LFEYLVKASVLLNRPELLELFHEARAAIDKYMRKEDWYVWVGMNKGRVTLPVFQSLEAFWPGILS 330
            .:|||:||.:|....|.|.:|.||..:..:|:.|:.|||.|.|:...:..|||.||:|||||:..
plant   264 FYEYLLKAYILFGDEEYLYIFQEAYRSAMQYLHKDPWYVEVNMDSAAIVWPVFNSLQAFWPGLQV 328

  Fly   331 IIGDTEPALRTISRYIGVWKKYGFLPEFYNIAAGEASPNREVYPLRPELIESAMYLYRATGNEYL 395
            :.||.:||:||.:.:..|||:|||.||.:|:|.......::.||||||||||..:||:||.:...
plant   329 LAGDVDPAIRTHTAFFSVWKRYGFTPEGFNLATLSVQYGQKSYPLRPELIESTYWLYKATRDPRY 393

  Fly   396 LEFGEHMLETLEFSAKTKCGYATIRNVVTHEKENRMESFFLAETSKYLYLLFDEENFLHNDGSGG 460
            |:.|...:.:|::.||..|||..|.:|..|::|:.|||||||||.|||:||||            
plant   394 LDAGRDFVASLQYGAKCPCGYCHITDVELHKQEDHMESFFLAETVKYLWLLFD------------ 446

  Fly   461 ELLSTEDDVCVVQAG--AYIFNTEAHPMDMSALHCCHAHNEDIYTSLDLQRFSPRAILERSKKRQ 523
              |:.:.| .:|..|  .|||:||.|                      |...:|:..|.|.    
plant   447 --LAVDSD-NLVDNGPYKYIFSTEGH----------------------LLPITPQISLARE---- 482

  Fly   524 VAVQEQWVPQCH------PENNEFFNKEDESVQAQDSEKEQEREQSGTSTTMAVDIEVFDEFQQP 582
                     .|.      |.|:   .|.::.|..:||..:....          |....:.|  |
plant   483 ---------HCSYFGGYCPSNS---TKLEQEVLGEDSSNDDHSN----------DYPYHESF--P 523

  Fly   583 AGDLLVS-----------NFEQIREERELNESLHRN---VVARNQLTVSDLD-EFFAQRRESFAS 632
            ...|:..           .|..:..|:...|.:::.   |.:.:.:.:||.. |...|..|.|.|
plant   524 VTGLIKGLCPGLTHAQKYGFSYVLPEKTDREDVNQPKPVVTSSSIVLISDQTVEKRPQEEEGFTS 588

  Fly   633 ASEALNYVKTFMGNYTMDVAFIRGLQLYDTNMSSVLGTGAQKEYES 678
            .||.   :.|..|..:.|..   |.:|  |.:.|  .|..|:.|.|
plant   589 QSEP---IMTISGGSSNDQT---GQEL--TLLES--ETDDQRSYSS 624

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Edem1NP_001259152.1 Glyco_hydro_47 48..486 CDD:460241 211/441 (48%)
AT5G43710NP_199184.1 Glyco_hydro_47 47..473 CDD:460241 212/465 (46%)

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