DRSC/TRiP Functional Genomics Resources

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Protein Alignment Edem1 and alpha-Man-Ib

DIOPT Version :10

Sequence 1:NP_001259152.1 Gene:Edem1 / 31154 FlyBaseID:FBgn0023511 Length:1004 Species:Drosophila melanogaster
Sequence 2:NP_651667.1 Gene:alpha-Man-Ib / 43436 FlyBaseID:FBgn0039634 Length:685 Species:Drosophila melanogaster


Alignment Length:532 Identity:151/532 - (28%)
Similarity:233/532 - (43%) Gaps:122/532 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 GVSGQKQYSKARKL------------ELREDVRRMFQHAYDGYLRHASNYDELRPLTCDGHDTWG 78
            |||.::...|.:.:            |.:..|...|:|::.||.::|..:|.|:|::...|: |.
  Fly   208 GVSFKEHLKKIKPILAKGQHFHGATNERQSAVVAAFKHSWAGYKKYAWGHDNLKPISQYSHE-WF 271

  Fly    79 SYSLTLIDALDTLATMGNFTEFRRAARLLEEKMDFDRDINVSVFETNIRIVGGLLSAHLLSKRAG 143
            ...||::|:|||:..||...||:.....:|:.:.||...:|::||..||::||||||:.||    
  Fly   272 GLGLTIVDSLDTMYIMGLDDEFKEGRDWVEQSLRFDTKRDVNLFEVTIRVLGGLLSAYHLS---- 332

  Fly   144 VELEPGWPCKGPLLRLAE--DVARRLLPAFVTNTGMPYGTVNLRYGVPKGETSI--------TCT 198
                      |..:.||:  ::..||||||.:.:.:||..|||      |:.|.        :.|
  Fly   333 ----------GDTMFLAKAAELGNRLLPAFQSPSNIPYSDVNL------GDLSAHSPKWSPDSST 381

  Fly   199 AGVGTFLIEFGTLSRLTGKTIYEDVAMKA---VHALWAYRSPIGLFGNHIDVQSGRWTALDS-GI 259
            :.|.|..:||..|||.|..:|||.||.|.   ||.|......:.:|   |:..:|.:....: .:
  Fly   382 SEVTTIQLEFRDLSRSTNISIYEQVAHKVNEKVHDLEKNHGLVPIF---INANTGTFRNYATISL 443

  Fly   260 GAGVDSLFEYLVKASVLLNRPE----LLELFHEARAAIDKYMR---KEDWYVWVG-MNKGRVTLP 316
            ||..||.:|||:|..:...|.:    :|:........:.:.||   :|.| |::| :..|:...|
  Fly   444 GARGDSYYEYLLKQWIQTGRKDNDNLILDYMQAVDGVLTQLMRRTPREHW-VYIGELINGKDFKP 507

  Fly   317 VFQSLEAFWPGILSIIG-----------------DTEPALRTISRYIGVWKKYGFLP-----EFY 359
            ....|..:.||.| |:|                 ||            .::.|...|     |..
  Fly   508 KMDHLTCYLPGTL-ILGHQNGMPDSHLILARDLLDT------------CYQTYMMNPTHLAAEIS 559

  Fly   360 NIAAGE-------ASPNREVYPLRPELIESAMYLYRATGNEYLLEFGEHMLETLEFSAKTKCGYA 417
            ..|..|       ..||.....||||.:||..|.|..|||....:.|..:.:..|..||...||.
  Fly   560 YFALTEKDDQDIYVKPNDAHNLLRPEFVESLYYFYSITGNRTYQDMGWKIFQAFETHAKVNAGYT 624

  Fly   418 TIRNVVTHEK---ENRMESFFLAETSKYLYLLFDEENFLHNDGSGGELLSTEDDVCVVQAGAYIF 479
            ::.||...:.   .:.||||:::||.||.||||                  .||...:....::|
  Fly   625 SMGNVKNTQSTRLRDLMESFWMSETLKYFYLLF------------------SDDRKEIDLEQWVF 671

  Fly   480 NTEAHPMDMSAL 491
            |:|.||:.:..|
  Fly   672 NSEGHPLPVYPL 683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Edem1NP_001259152.1 Glyco_hydro_47 48..486 CDD:460241 143/491 (29%)
alpha-Man-IbNP_651667.1 Glyco_hydro_47 242..680 CDD:460241 144/493 (29%)

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