DRSC/TRiP Functional Genomics Resources

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Protein Alignment Edem1 and Man1c1

DIOPT Version :10

Sequence 1:NP_001259152.1 Gene:Edem1 / 31154 FlyBaseID:FBgn0023511 Length:1004 Species:Drosophila melanogaster
Sequence 2:XP_063144134.1 Gene:Man1c1 / 362625 RGDID:1309672 Length:655 Species:Rattus norvegicus


Alignment Length:529 Identity:155/529 - (29%)
Similarity:244/529 - (46%) Gaps:112/529 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 QKQYSKARKLELREDVRRMFQHAYDGYLRHASNYDELRPLTCDGHD--TWGSYS-LTLIDALDTL 91
            :.|.|::.....||.::.|.:.::..|.|:|...:||||||.||.:  .:|..| .|:||:||||
  Rat   158 ESQESQSLVRAQREKIKEMMRFSWQSYRRYAMGKNELRPLTKDGFEGSMFGGLSGATIIDSLDTL 222

  Fly    92 ATMGNFTEFRRAARLLEEKMDFDRDINVSVFETNIRIVGGLLSAHLLSKRAGVELEPGWPCKGPL 156
            ..|....||:.|...:::....:.....|:||.|||.:||||||..|:   |.|:     .:...
  Rat   223 YLMELKEEFQEAKAWVQDSFHLNVSGEASLFEVNIRYIGGLLSAFYLT---GEEV-----FRVKA 279

  Fly   157 LRLAEDVARRLLPAFVTNTGMPYGTVNLRYG----VPKGETSITCTAGVGTFLIEFGTLSRLTGK 217
            ::|.|    :|||||.|.||:|.|.||.:.|    ...|.:||  .|..|:..:||..|:.|:|.
  Rat   280 IKLGE----KLLPAFNTPTGIPKGVVNFKSGSWGWATAGSSSI--LAEFGSLHLEFLHLTELSGN 338

  Fly   218 TIYEDVAMKAV---------------HALWAYRS---------------PIGLFGNHIDVQSGRW 252
            .|:.:..:...               |..|..::               |.||:.|.:...||.|
  Rat   339 PIFAEKVLSGSCWQQAGGRLAELIPRHCSWLPKATRVRNIRKVLREIDKPFGLYPNFLSPVSGNW 403

  Fly   253 TALDSGIGAGVDSLFEYLVKASVLLNRP--ELLELFHEARAAIDKYMRKEDWYVWVGMNKGRVTL 315
            ......:|...||.:|||:|:.::..:.  |...:::||..||:.|:        |.::.|.:|.
  Rat   404 VQHHVSVGGLGDSFYEYLIKSWLMSAKTDMEAKTMYYEALEAIETYL--------VNVSPGGLTY 460

  Fly   316 PV----------FQSLEAFWPGILSI-IGDTEPALRTISR-------------YIGVWKKYGFLP 356
            ..          ...|..|..|:::: ..|.:...|...|             |.....|.|  |
  Rat   461 IAEWRGGILDHKMGHLACFSGGMIALGAEDAKEDKRAYYRELAAQITRTCHESYARSDTKLG--P 523

  Fly   357 EFYNIAAGEASP----NREVYPLRPELIESAMYLYRATGNEYLLEFGEHMLETLEFSAKTKCGYA 417
            |.:...:|..:.    :...|.||||::||.|||:|.|.:....|:|..::..||...:|:.|::
  Rat   524 EAFWFNSGREAVATQLSESYYILRPEVVESYMYLWRQTHDPIYREWGWEVVMALEKHCRTEGGFS 588

  Fly   418 TIRNVVTH--EKENRMESFFLAETSKYLYLLFDEENFLHNDGSGGELLSTEDDVCVVQAGAYIFN 480
            .|::|.:.  ..:||.:|||||||.|||||||.|:          ::||.||         ::||
  Rat   589 GIQDVYSSNPNHDNRQQSFFLAETLKYLYLLFSED----------DVLSLED---------WVFN 634

  Fly   481 TEAHPMDMS 489
            |||||:.::
  Rat   635 TEAHPLPVN 643

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Edem1NP_001259152.1 Glyco_hydro_47 48..486 CDD:460241 150/506 (30%)
Man1c1XP_063144134.1 None

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