DRSC/TRiP Functional Genomics Resources

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Protein Alignment Edem1 and mns1

DIOPT Version :10

Sequence 1:NP_001259152.1 Gene:Edem1 / 31154 FlyBaseID:FBgn0023511 Length:1004 Species:Drosophila melanogaster
Sequence 2:NP_594139.2 Gene:mns1 / 2541719 PomBaseID:SPAC2E1P5.01C Length:521 Species:Schizosaccharomyces pombe


Alignment Length:575 Identity:154/575 - (26%)
Similarity:232/575 - (40%) Gaps:158/575 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LICAVLLVLLSTGVSGQKQYSKARKLELRED-VRRMFQHAYDGYLRHASNYDELRPLTCDGHD-- 75
            ::|..:..|.:| |.....|:|.:....|:. :::.|..::..|..:....||..|:...|.:  
pombe    19 VLCVPIYYLYTT-VQRPPGYTKLKGSTRRKALIKKTFIESWTDYETYGWGKDEYYPIIKRGRNYL 82

  Fly    76 ----TWGSYSLTLIDALDTLATMGNFTEFRRAARLLEEKMDFDR-DINVSVFETNIRIVGGLLSA 135
                .|     .:||:|||:..||...:..||...:...:.::: |..||||||.|||:|||||:
pombe    83 RKGMGW-----MIIDSLDTMMIMGLDEQVLRAREWVNNSLTWNQDDEEVSVFETTIRILGGLLSS 142

  Fly   136 HLLSKRAGVELEPGWPCKGPLLRLAEDVARRLLPAFVTNTGMPYGTVNL--RYGVPKGETSITCT 198
            :.||:            ....|..|.|:|.|||.|:.|:||:|...|||  |....:.......|
pombe   143 YHLSQ------------DKLYLDRAVDLADRLLAAYNTSTGLPRSNVNLGTRKSRKRTREYFVST 195

  Fly   199 AGVGTFLIEFGTLSRLTGKTIYEDVAMKAVHAL-----WAYRSPIGLFGNHIDVQSGRWTALDSG 258
            |..||..:|...||.|||...|...|.|.:..|     |::   .||....:::.:|.:...:..
pombe   196 AESGTVQMELRYLSYLTGDPKYWITADKTMEVLLGDATWSH---TGLVPITVNLITGAYVGRNIR 257

  Fly   259 IGAGVDSLFEYLVKASVLLNRPELLELFHEA---RAAID-------KYM---RKEDWYVWVGMNK 310
            :|:..||.:|||:|..        |:||...   |.|.|       :|:   ...:.:.::....
pombe   258 LGSHGDSYYEYLLKQD--------LQLFSSGTVYRKAFDLSVDGIIEYLLNYTTPNHFAYIAELP 314

  Fly   311 G---RVTLPVFQSLEAFWPGIL---SIIGDTEPALRTISRYIGVWKKYGFLP------------- 356
            |   ...||....|..|.||.|   :..|.:..|.||.       |.:|...             
pombe   315 GGLEHAQLPKMDHLVCFLPGTLMWGATNGTSLEAARTS-------KNWGTRQERDVKLAQELMRT 372

  Fly   357 --EFYNIAAGEASP----------NREVYP--------LRPELIESAMYLYRATGNEYLLEFGEH 401
              |.||:.|...:|          ..|:|.        :|||.:||...|||.|.:|...|:|.:
pombe   373 CYEMYNMTATGLAPEIVFFDVDQTKNEIYSKRRDQHNLMRPETVESLFILYRITRDEIYREWGWN 437

  Fly   402 M------------------LETLEFSAKTKCGYATIRNVVTHEKENRMESFFLAETSKYLYLLFD 448
            :                  |:::| |.|.|            ::.::.|||:.|||.||||||| 
pombe   438 IFVSFLRYSRLPGRDAFTCLDSVE-SKKVK------------DQRDKTESFWFAETLKYLYLLF- 488

  Fly   449 EENFLHNDGSGGELLSTEDDVCVVQAGAYIFNTEAHPMDMSALHCCHAHNEDIYT 503
                             |||..::....|.|||||||....      .:|.|:||
pombe   489 -----------------EDDFSILPLTNYTFNTEAHPFPNI------ENNMDLYT 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Edem1NP_001259152.1 Glyco_hydro_47 48..486 CDD:460241 142/521 (27%)
mns1NP_594139.2 Glyco_hydro_47 54..510 CDD:460241 143/521 (27%)

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