DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL16 and SIL1

DIOPT Version :10

Sequence 1:NP_525041.1 Gene:mRpL16 / 31150 FlyBaseID:FBgn0023519 Length:243 Species:Drosophila melanogaster
Sequence 2:NP_014611.1 Gene:SIL1 / 854126 SGDID:S000005391 Length:421 Species:Saccharomyces cerevisiae


Alignment Length:200 Identity:41/200 - (20%)
Similarity:75/200 - (37%) Gaps:46/200 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 EMVHNTLLHKQYAIVATGGGRLRWGHYEMMRLTIGRKMNV-NTMFATWRVPA-PWQPITKKGQGQ 139
            ::|.:|:||.....|.:||..:.....:.:.:: |..:.| |..:.....|. .||||.   .||
Yeast    15 KLVASTILHSSIHSVPSGGEIISAEDLKELEIS-GNSICVDNRCYPKIFEPRHDWQPIL---PGQ 75

  Fly   140 RMGGGKGAIDHYVTPIKAGRV----IVEIAGKCEFV-------------EVKQFLQQVANQLPFQ 187
            .:.||.....:..|.:|..::    .|...|..|.:             |.....:::.|.:...
Yeast    76 ELPGGLDIRINMDTGLKEAKLNDEKNVGDNGSHELIVSSEDMKASPGDYEFSSDFKEMRNIIDSN 140

  Fly   188 ATVVSQEM--LDE--QRVAEEEQTRQ------------------NEN-PFTMKYVIQNNLSGCHR 229
            .|:.||::  |::  .|:.|.....:                  ||| |.|::.:....::.|.|
Yeast   141 PTLSSQDIARLEDSFDRIMEFAHDYKHGYKIITHEFALLANLSLNENLPLTLRELSTRVITSCLR 205

  Fly   230 WLSPV 234
            ...||
Yeast   206 NNPPV 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL16NP_525041.1 Ribosomal_L16 61..191 CDD:459733 27/132 (20%)
SIL1NP_014611.1 SIL1 123..421 CDD:407047 16/87 (18%)

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