DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL16 and amph

DIOPT Version :9

Sequence 1:NP_001259148.1 Gene:mRpL16 / 31150 FlyBaseID:FBgn0023519 Length:243 Species:Drosophila melanogaster
Sequence 2:XP_031759042.1 Gene:amph / 100125136 XenbaseID:XB-GENE-993128 Length:937 Species:Xenopus tropicalis


Alignment Length:70 Identity:20/70 - (28%)
Similarity:25/70 - (35%) Gaps:29/70 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 SGNMAIVNTAGLKYFAPPIKYQNVEQPERPKLRVIERQPQLPPN--IRP--------PKMQKRLR 71
            ||.:.|..|.     :||     .|.||.|       .|...||  :.|        ||...:||
 Frog   252 SGPLRIAKTP-----SPP-----EEVPEEP-------SPLASPNHTLAPISSPAPARPKSPSQLR 299

  Fly    72 YMRGP 76
              :||
 Frog   300 --KGP 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL16NP_001259148.1 Ribosomal_L16 64..184 CDD:278672 6/13 (46%)
amphXP_031759042.1 BAR_Amphiphysin_I_II 26..236 CDD:153295
PHA02682 <283..>358 CDD:177464 7/22 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0197
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
21.860

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