DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Pgam5 and AT5G22620

DIOPT Version :9

Sequence 1:	NP_569951.1	Gene:	Pgam5 / 31143	FlyBaseID:	FBgn0023517	Length:	289	Species:	Drosophila melanogaster
Sequence 2:	NP_001154730.1	Gene:	AT5G22620 / 832325	AraportID:	AT5G22620	Length:	482	Species:	Arabidopsis thaliana

Alignment Length:	235	Identity:	54/235 - (22%)
Similarity:	95/235 - (40%)	Gaps:	65/235 - (27%)

- Green bases have known domain annotations that are detailed below.

  Fly    57 RALVRPLRNSQPEEENRYNAELEKAKAKKARHIILVRHG-----EYLDVGDSDDTHHLTERGRKQ 116
            |.|:|    |....::::..|..|       .::|||||     |...:..|.|...||::|..|
plant    29 RLLIR----SSSSLQDQFTVETTK-------RVVLVRHGQSTWNEEGRIQGSSDFSVLTKKGESQ 82

  Fly   117 AEFTGKRLCELGIKWDKVVASTMVRAQETSDII-------------LKQID---FE-------KE 158
            ||.:.:.|  :...:|....|.:.|:::|::||             |::||   |:       ||
plant    83 AEISRQML--IDDSFDVCFTSPLKRSKKTAEIIWGSRESEMIFDYDLREIDLYSFQGLLKKEGKE 145

  Fly   159 KVVNCAFLREGAPIPPQPPVGHWKPEASQFLRDGSRIEAGFRRYFHRA---YPD---QEKESYTL 217
            |... ||.:             |:.:.:.|:.||   ....|..:.||   :|.   .|.:| .|
plant   146 KFGE-AFKQ-------------WQEDPANFIIDG---HYPVRELWSRARSCWPGILAHESKS-VL 192

  Fly   218 IVGHGNVIRYFVCRALQFPAEGWLRININHASITWLTISP 257
            :|.|..|.:..:..|:....|.:..:..::..::.|...|
plant   193 VVAHNAVNQALLATAIGLGTEYFRSLLQSNCGVSVLDFIP 232

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Pgam5	NP_569951.1	HP_PGM_like	88..265	CDD:132718	48/204 (24%)
AT5G22620	NP_001154730.1	His_Phos_1	50..241	CDD:278716	48/203 (24%)
AT5G22620	NP_001154730.1	PhoE	264..471	CDD:223483
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1112626at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010