DRSC/TRiP Functional Genomics Resources

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Protein Alignment Scgdelta and SGCG

DIOPT Version :10

Sequence 1:NP_525039.1 Gene:Scgdelta / 31129 FlyBaseID:FBgn0025391 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_001365173.1 Gene:SGCG / 6445 HGNCID:10809 Length:309 Species:Homo sapiens


Alignment Length:271 Identity:104/271 - (38%)
Similarity:165/271 - (60%) Gaps:12/271 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 LGLIGWRKKCLYTLLLLLMLLIITNLVLTLWILKVMEFSTEGMGQLKIVPGGIQLSGQAIIMDML 198
            :|:.||||:|||..:|||:::::.||.||:||||||.||..|||.|.:...|::|.|::..:..|
Human    44 IGIYGWRKRCLYLFVLLLLIILVVNLALTIWILKVMWFSPAGMGHLCVTKDGLRLEGESEFLFPL 108

  Fly   199 RASTIRSRHGQPISIESSRNFSINTRDPNGMIENHLFLGHDKFECLSAGFRINDTNGRSLFSVNR 263
            .|..|.||....:.::|::|.::|.|:..|.:...|.:|....|..:..|:||..:|:.||:|:.
Human   109 YAKEIHSRVDSSLLLQSTQNVTVNARNSEGEVTGRLKVGPKMVEVQNQQFQINSNDGKPLFTVDE 173

  Fly   264 DEVTIGAHALRIDGEGGAVFRESVQTPHVRAEPGRELRLESPTRQLEMTAAKDINLQSRAGGIEV 328
            .||.:|...||:.|..||:|..||:||.|||:|.::||||||||.|.|.|.:.:::|:.||.||.
Human   174 KEVVVGTDKLRVTGPEGALFEHSVETPLVRADPFQDLRLESPTRSLSMDAPRGVHIQAHAGKIEA 238

  Fly   329 VALEDVKFRALDGSLRLESSKILMPNLRTAQPPILGTAQSRDHMHRVFQLCACSNGKLFLAAPHS 393
            ::..|:.|.:.||.|.|::..:.:|.|      :.||.........::::|.|.:|||:|:.   
Human   239 LSQMDILFHSSDGMLVLDAETVCLPKL------VQGTWGPSGSSQSLYEICVCPDGKLYLSV--- 294

  Fly   394 ICAGDDSTVCR 404
              || .||.|:
Human   295 --AG-VSTTCQ 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ScgdeltaNP_525039.1 Sarcoglycan_1 135..393 CDD:461428 99/257 (39%)
SGCGNP_001365173.1 Sarcoglycan_1 43..296 CDD:461428 99/262 (38%)

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