Protein Alignment Scgdelta and Sgcd

DIOPT Version :10

• Sequence 1: NP_525039.1
• Gene: Scgdelta / 31129
• FlyBaseID: FBgn0025391
• Length: 404
• Species: Drosophila melanogaster
• Sequence 2: XP_038942473.1
• Gene: Sgcd / 497892
• RGDID: 1306638
• Length: 309
• Species: Rattus norvegicus
• Alignment Length: 276
• Identity: 108/276 - (39%)
• Similarity: 163/276 - (59%)
• Gaps: 17/276 - (6%)

  Fly   134 LGLIGWRKKCLYTLLLLLMLLIITNLVLTLWILKVMEFSTEGMGQLKIVPGGIQLSGQAIIMDML 198
            :|:.||||:|||..:||||:||:.||.:|:||||||.|:.:|||.|:|...|::|.|.:..:..|
  Rat    44 VGIYGWRKRCLYFFVLLLMILILVNLAMTIWILKVMNFTIDGMGNLRITEKGLKLEGDSEFLQPL 108

  Fly   199 RASTIRSRHGQPISIESSRNFSINTRDPNGMIENHLFLGHDKFECLSAGFRINDTNGRSLFSVNR 263
            .|..|:||.|..:..:|:||.::|..:....:...|..|....|.....|.:...:|:.|||.:.
  Rat   109 YAKEIKSRPGNALYFKSARNVTVNILNDQTKVLTQLVTGPKAVEAYGKRFEVKTVSGKLLFSADD 173

  Fly   264 DEVTIGAHALRIDGEGGAVFRESVQTPHVRAEPGRELRLESPTRQLEMTAAKDINLQSRAGGIEV 328
            .||.:||..||:.|..|.||.:|::||:|||:|.:|||||||||.|.|.|.|.:.:.:.||.:|.
  Rat   174 SEVVVGAERLRVLGAEGTVFPKSIETPNVRADPFKELRLESPTRSLVMEAPKGVEINAEAGNMEA 238

  Fly   329 VALEDVKFRALDGSLRLESSKILMPNLRTAQPPILGTAQSRDHMHRVFQLCACSNGKLFLAAPHS 393
            ....:::..:.||.::|:::||.:|.|........||.|      :||::|.|:||:|||:.
  Rat   239 TCRSELRLESKDGEIKLDAAKIKLPRLPRGSYTPTGTRQ------KVFEVCVCANGRLFLSQ--- 294

  Fly   394 ICAGDDST------VC 403
              ||..||      ||
  Rat   295 --AGTGSTCQINTSVC 308

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scgdelta	NP_525039.1	Sarcoglycan_1	135..393	CDD:461428	102/257 (40%)
Sgcd	XP_038942473.1	Sarcoglycan_1	43..298	CDD:461428	104/264 (39%)