Protein Alignment Scgdelta and Sgcz

DIOPT Version :10

• Sequence 1: NP_525039.1
• Gene: Scgdelta / 31129
• FlyBaseID: FBgn0025391
• Length: 404
• Species: Drosophila melanogaster
• Sequence 2: NP_001102345.2
• Gene: Sgcz / 364605
• RGDID: 1307788
• Length: 311
• Species: Rattus norvegicus
• Alignment Length: 272
• Identity: 107/272 - (39%)
• Similarity: 161/272 - (59%)
• Gaps: 14/272 - (5%)

  Fly   134 LGLIGWRKKCLYTLLLLLMLLIITNLVLTLWILKVMEFSTEGMGQLKIVPGGIQLSGQAIIMDML 198
            :|:.||||:|||..:|||::.:|.||.:|:||||||.|:.:|||.|::...||:|.|.:..:..|
  Rat    39 VGIYGWRKRCLYFFVLLLLVTMIVNLAMTIWILKVMNFTVDGMGNLRVTKKGIRLEGISEFLLPL 103

  Fly   199 RASTIRSRHGQPISIESSRNFSINTRDPNGMIENHLFLGHDKFECLSAGFRIN-DTNGRSLFSVN 262
            ....|.||...|:.::|.||.::|.|:..|.:...|.:|.:..|.....|.:. ..:||.|||.:
  Rat   104 YVKEIHSRKDSPLVLQSDRNVTVNARNHMGQLTGQLTVGAEAVEAQCKRFEVRASEDGRVLFSAD 168

  Fly   263 RDEVTIGAHALRIDGEGGAVFRESVQTPHVRAEPGRELRLESPTRQLEMTAAKDINLQSRAGGIE 327
            .||:||||..|::.|..||||..||:||||||||.::||||||||.|.|.|.:.:.:.:.||..:
  Rat   169 EDEITIGAEKLKVTGTEGAVFGHSVETPHVRAEPSQDLRLESPTRSLIMEAPRGVQVSAAAGDFK 233

  Fly   328 VVALEDVKFRALDGSLRLESSKILMPNLRTAQPPI---LGTAQSRDHMHRVFQLCACSNGKLFLA 389
            ....:::..::.:|.:.|.:..|.:.||     ||   ..:..|.:....|::||.|.||||:|:
  Rat   234 ATCRKELHLQSTEGEIFLNADSIRLGNL-----PIGSFSSSPSSSNSRQTVYELCVCPNGKLYLS 293

  Fly   390 APHSICAGDDST 401
            .     ||.|||
  Rat   294 P-----AGVDST 300

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scgdelta	NP_525039.1	Sarcoglycan_1	135..393	CDD:461428	102/261 (39%)
Sgcz	NP_001102345.2	Sarcoglycan_1	38..296	CDD:461428	102/266 (38%)