DRSC/TRiP Functional Genomics Resources

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Protein Alignment Scgdelta and sgcz

DIOPT Version :10

Sequence 1:NP_525039.1 Gene:Scgdelta / 31129 FlyBaseID:FBgn0025391 Length:404 Species:Drosophila melanogaster
Sequence 2:XP_017951080.2 Gene:sgcz / 100486888 XenbaseID:XB-GENE-985523 Length:298 Species:Xenopus tropicalis


Alignment Length:278 Identity:103/278 - (37%)
Similarity:163/278 - (58%) Gaps:15/278 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 LGLIGWRKKCLYTLLLLLMLLIITNLVLTLWILKVMEFSTEGMGQLKIVPGGIQLSGQAIIMDML 198
            :|:.||||:|||..:|||::.:|.||.:|:||||||.|:.:|||.|:|...|::|.|.:..:..|
 Frog    25 VGIYGWRKRCLYFFVLLLLVTMIVNLAMTIWILKVMNFTVDGMGNLRITKKGVRLEGVSEFLLPL 89

  Fly   199 RASTIRSRHGQPISIESSRNFSINTRDPNGMIENHLFLGHDKFECLSAGFRI-NDTNGRSLFSVN 262
            ....|.||...|:..:|.||.::|.|:.||.:...:.:|.|..|.....|.: :..:.|.||..:
 Frog    90 YVKEIHSRKDSPVVFQSDRNITLNARNENGQLTGQMTVGADAVEAQCKRFEVKSHEDERILFMAD 154

  Fly   263 RDEVTIGAHALRIDGEGGAVFRESVQTPHVRAEPGRELRLESPTRQLEMTAAKDINLQSRAGGIE 327
            .:|:.|||..||:.|..|::|..||:|||:||.|.::||||||||.|.|.|.|.:::.:.||..:
 Frog   155 EEEIVIGADRLRVTGTEGSIFEHSVETPHIRAGPSQDLRLESPTRSLTMEAPKGVHISAVAGEFK 219

  Fly   328 VVALEDVKFRALDGSLRLESSKILMPNL-----RTAQPPILGTAQSRDHMHRVFQLCACSNGKLF 387
            ....::::.::.||.:.|.:..|.:.||     .::.|..:|..|:      |::||.|.||||:
 Frog   220 ASCRKELQLQSTDGEIFLNADNIRLGNLPHGSYSSSTPNAVGPRQT------VYELCICPNGKLY 278

  Fly   388 L--AAPHSICAGDDSTVC 403
            |  |...|.|. .:|.:|
 Frog   279 LSPAGASSTCQ-LNSNIC 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ScgdeltaNP_525039.1 Sarcoglycan_1 135..393 CDD:461428 99/265 (37%)
sgczXP_017951080.2 Sarcoglycan_1 24..285 CDD:461428 99/265 (37%)

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