DRSC/TRiP Functional Genomics Resources

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Protein Alignment sta and MRP4

DIOPT Version :10

Sequence 1:NP_476750.1 Gene:sta / 31106 FlyBaseID:FBgn0003517 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_011859.1 Gene:MRP4 / 856384 SGDID:S000000996 Length:394 Species:Saccharomyces cerevisiae


Alignment Length:210 Identity:53/210 - (25%)
Similarity:92/210 - (43%) Gaps:31/210 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 ITKMLVATTHLGSENVNFQ--MEQYVYKRRADGVNILNLGKTWEKLQLAARAIVAIDNPSDIFVI 77
            :..::.|..|||.....::  .:.|:| ....|::|::|.:|...|:.||:.:..:.....|.:.
Yeast   185 VESLMSAGVHLGQSTSLWRSSTQSYIY-GEYKGIHIIDLNQTLSYLKRAAKVVEGVSESGGIILF 248

  Fly    78 SSRPIGQ-RAVLKFAKYTDTTPIAGRFTPGAFTNQIQ---------------PAFR--------- 117
            .....|| |.:.:.||.|....::.|:.||..||..:               |..|         
Yeast   249 LGTRQGQKRGLEEAAKKTHGYYVSTRWIPGTLTNSTEISGIWEKQEIDSNDNPTERALSPNETSK 313

  Fly   118 --EPRLLVVTDPNTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAR 180
              :|.||||.:|..:...::||....:|.||..:|||....:...||.|:.|..|:..:..:|||
Yeast   314 QVKPDLLVVLNPTENRNALLEAIKSRVPTIAIIDTDSEPSLVTYPIPGNDDSLRSVNFLLGVLAR 378

  Fly   181 EVLR-LRGTISRSVE 194
            ...| |:..::|:.|
Yeast   379 AGQRGLQNRLARNNE 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
staNP_476750.1 PTZ00254 1..247 CDD:240331 53/210 (25%)
MRP4NP_011859.1 Ribosomal_S2 188..383 CDD:459759 49/195 (25%)

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