DRSC/TRiP Functional Genomics Resources

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Protein Alignment sta and RPS0A

DIOPT Version :10

Sequence 1:NP_476750.1 Gene:sta / 31106 FlyBaseID:FBgn0003517 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_011730.1 Gene:RPS0A / 853128 SGDID:S000003446 Length:252 Species:Saccharomyces cerevisiae


Alignment Length:239 Identity:137/239 - (57%)
Similarity:170/239 - (71%) Gaps:3/239 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LKEDDITKMLVATTHLGSENVNFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAIVAIDNPSDI 74
            |..:|...:|.|.||||:.||....|.||:..|.|||:::|:|||||||.||||.|.||.||.|:
Yeast     9 LTPEDAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIPNPEDV 73

  Fly    75 FVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPNTDHQPIMEASY 139
            ..||||..|||||||||.:|..||||||||||:|||.|..:|:||||::||||.:|.|.|.||||
Yeast    74 VAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRSDAQAIKEASY 138

  Fly   140 VNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGT-ISRSVEWPVVVDLFF 203
            |||||||.|:.|||..::|:||||||:..|||||:|:|||||||||||. :.|:..|.::.||:|
Yeast   139 VNIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRTQPWSIMPDLYF 203

  Fly   204 YRDPEEAEKE--EAAAKELLPPPKIEEAVDHPVEETTNWADEVA 245
            ||||||.|::  |.|..|.....:.:|.|.....|.|.||:|.|
Yeast   204 YRDPEEVEQQVAEEATTEEAGEEEAKEEVTEEQAEATEWAEENA 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
staNP_476750.1 PTZ00254 1..247 CDD:240331 137/239 (57%)
RPS0ANP_011730.1 PTZ00254 1..252 CDD:240331 137/239 (57%)

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