DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr2a and lite-1

DIOPT Version :10

Sequence 1:NP_001162633.1 Gene:Gr2a / 31093 FlyBaseID:FBgn0265139 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_509043.3 Gene:lite-1 / 180894 WormBaseID:WBGene00001803 Length:439 Species:Caenorhabditis elegans


Alignment Length:445 Identity:90/445 - (20%)
Similarity:165/445 - (37%) Gaps:94/445 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RALEPLHRACQVCNLWPWRLAPPPDSEGILLRRSRWLELYGWTVLIAATSFTVYGLFQESSVEEK 69
            |.|.|::....:..|          ::.|....|....:|.|.| .....||....|.:..|...
 Worm    46 RTLYPIYYLLLILGL----------NQSIRPNNSLLFRIYSWLV-FCLLLFTTLRKFNQVGVRPN 99

  Fly    70 QDSESTISSIGHTVDFIQLVGMRVAHLAALLEALWQRQAQRGFFAELGEIDRLLSKALRVDVEAM 134
            ...|:......:....|.|....:. |:.||.:|           :|..:.....|.|::..: .
 Worm   100 GTRENLQEFFANPRSMITLCNALIM-LSGLLASL-----------QLYTLGAKRLKPLKILCQ-F 151

  Fly   135 RINMR-RQTSRRAVWI----------------------LWGYAVSQLLILGAKLLSRGDRFPIYW 176
            .:|:| :|..||...|                      .|||.   |.|:|...|.....|.:..
 Worm   152 SLNVRTKQAERRQFMINTFLAVFSGLLALTMAATYAMSKWGYI---LYIVGTPNLDTETIFCVLL 213

  Fly   177 ISYLLPLLVCGLRYFQIFNATQLVRQRLDVLLVALQQLQLHQKGPAVDTVLEEQED--LEEAAMD 239
            .||.|.:....:....|     |..|...|:..:::.| :::..||      ||::  |.|:::.
 Worm   214 DSYALFVSRAAISALAI-----LFYQHCSVIRRSIKHL-INEMVPA------EQDECPLPESSLQ 266

  Fly   240 RLIAVRLVYQRVWALVALLNRCYGLSMLMQVGNDFLAITSNCYWMFLNFRQSAASPFDILQIVAS 304
            ::...::.|||::...|::...|...:....|   :.|...|:.||:.....:....:::.||  
 Worm   267 KIHDCQISYQRIFNGKAVIEEYYSFVLFYSYG---VCIPIFCFLMFVGMSAQSICWSEVVSIV-- 326

  Fly   305 GVWSAPHLGNVLVLSLLCDRTAQCASRLALCLHQVSVDLRNESHNALVGTLVR-----YCAPLII 364
             :|    :.|.:               |.|.|..:...:.||..:.||.:..|     :.....:
 Worm   327 -IW----IVNAI---------------LVLLLFSLPAFMINEDGDRLVASSFRMYHETFHEERDL 371

  Fly   365 LVPLQITQFSLQLLHQRLHFSAAGFFNVDCTLLYTIVGATTTYLIILIQFHMSES 419
            .|..|:|.|:.|:...:|..||..:|.:|.::|.::..|..||.:||.:|.:..:
 Worm   372 TVLSQMTFFTFQIHSTKLTLSACNYFYMDRSILLSLFSAILTYFLILWEFDIKNN 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr2aNP_001162633.1 7tm_7 7..418 CDD:462463 89/440 (20%)
lite-1NP_509043.3 7tm_7 75..425 CDD:462463 84/403 (21%)

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