Protein Alignment ssx and GR-RBP3

DIOPT Version :9

• Sequence 1: NP_569908.1
• Gene: ssx / 31086
• FlyBaseID: FBgn0024987
• Length: 485
• Species: Drosophila melanogaster
• Sequence 2: NP_001330940.1
• Gene: GR-RBP3 / 836224
• AraportID: AT5G61030
• Length: 309
• Species: Arabidopsis thaliana
• Alignment Length: 267
• Identity: 63/267 - (23%)
• Similarity: 89/267 - (33%)
• Gaps: 121/267 - (45%)

  Fly   161 NKRL--KVSYARPG-GQSIK---DTNLYVINLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRP 219
            ||:|  :||.:.|. .|:|:   .:.|::..::.::::|.|...|:.||.:|...::.|:.|||.
plant    16 NKQLNAQVSLSSPSLFQAIRCMSSSKLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRS 80

  Fly   220 RGVAFVRYNKREEAQEAIKALNNTVPEGGSQPIWVRLAEEHGKAKAAQFMAQI-------GGGNG 277
            ||..||.:...|.|..||:||:.              .:.||:.....:....       |||.|
plant    81 RGFGFVTFTSSEAASSAIQALDG--------------RDLHGRVVKVNYANDRTSGGGFGGGGYG 131

  Fly   278 GGGGGPPHMGPGGPMHPPHHHNNHHHNNHHNPHMPPHHHQPQHPHQHPQHHPQLHHMQHHHPNNH 342
            |||||  :.|.||
plant   132 GGGGG--YGGSGG---------------------------------------------------- 142

  Fly   343 NNNHPNNHHHNNNNNNHHNMGGPHPHHMQQMHPMGMNMGMGVNMGMGMGMGMPIHGGGGGGGGGG 407
                               .||                |.|...|.| |.|    ||.||.||..
plant   143 -------------------YGG----------------GAGGYGGSG-GYG----GGAGGYGGNS 167

  Fly   408 GGGGGGN 414
            |||.|||
plant   168 GGGYGGN 174

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ssx	NP_569908.1	RRM_SF	93..173	CDD:302621	6/14 (43%)
		RRM_SF	179..257	CDD:302621	21/77 (27%)
GR-RBP3	NP_001330940.1	RRM2_NsCP33_like	41..116	CDD:410187	23/88 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910