DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment ssx and Srsf4

DIOPT Version :9

Sequence 1:	NP_569908.1	Gene:	ssx / 31086	FlyBaseID:	FBgn0024987	Length:	485	Species:	Drosophila melanogaster
Sequence 2:	NP_001102155.1	Gene:	Srsf4 / 362612	RGDID:	1561347	Length:	488	Species:	Rattus norvegicus

Alignment Length:	190	Identity:	46/190 - (24%)
Similarity:	73/190 - (38%)	Gaps:	47/190 - (24%)

- Green bases have known domain annotations that are detailed below.

  Fly    97 INYLPQDMTDRELYNLFSGCGPINTCKIMR-DFKTGYSFGYGFVDYKTESDSEDAIQKLNGFYVR 160
            |..|.....:|::...|.|.|     ||:. |.|.    |||||::....|::||:.:|||..:.
  Rat     6 IGRLSYQARERDVERFFKGYG-----KILEVDLKN----GYGFVEFDDLRDADDAVYELNGKDLC 61

  Fly   161 NKRLKVSYARP------------------------GGQSIKDTNLYVINLSRNINDDMLDRIFSP 201
            .:|:.|.:||.                        |..:..:..|.|.|||...:...|......
  Rat    62 GERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQ 126

  Fly   202 YGLIVQRNILRDKLTGRPRG--VAFVRYNKREEAQEAIKALNNTVPEGGSQPIWVRLAEE 259
            .|.:.    ..|...||...  :.||.|:   :.:.|::.|:.|...|..    :||.|:
  Rat   127 AGEVT----YADAHKGRKNEGVIEFVSYS---DMKRALEKLDGTEVNGRK----IRLVED 175

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
ssx	NP_569908.1	RRM_SF	93..173	CDD:302621	25/100 (25%)
ssx	NP_569908.1	RRM_SF	179..257	CDD:302621	18/79 (23%)
Srsf4	NP_001102155.1	RRM1_SRSF4_like	3..72	CDD:240783	24/74 (32%)
Srsf4	NP_001102155.1	RRM2_SRSF4_like	104..175	CDD:241044	19/81 (23%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910