DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment ssx and Rbmy

DIOPT Version :9

Sequence 1:	NP_569908.1	Gene:	ssx / 31086	FlyBaseID:	FBgn0024987	Length:	485	Species:	Drosophila melanogaster
Sequence 2:	NP_001159856.1	Gene:	Rbmy / 19657	MGIID:	104732	Length:	380	Species:	Mus musculus

Alignment Length:	375	Identity:	72/375 - (19%)
Similarity:	131/375 - (34%)	Gaps:	92/375 - (24%)

- Green bases have known domain annotations that are detailed below.

  Fly   178 DTN----LYVINLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYNKREEAQEAIK 238
            :||    :::..|:.......|..||..:|.:.:..::||:.|.:.||.||:.:.:..:|:.|:|
Mouse     3 ETNQPGKIFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAKNAVK 67

  Fly   239 ALNNTVPEGGSQPIWVRLAE-----EHGKAKAAQFMAQIGGGN-----GGGGGGPPHMGP----- 288
            .:|..:.:|  :.|.|:.|.     |.|..|.....::..|.:     |.||......||
Mouse    68 EMNGVILDG--KRIKVKQARRPSSLESGSKKRPPSFSRTRGASRILKCGRGGRSRARSGPSCEGN 130

  Fly   289 -GGPMHPPHHH---NNHHHNNHHNPHM----PPHHH-------------QPQHPHQH------PQ 326
             ||..:.|:.:   :..|.....||..    ||...             :.:.||:.      |:
Mouse   131 LGGDRYTPNFNVSSSGRHFAVKRNPSSKRDDPPSKRSATSAQTRSNTGLRGREPHRREISRNMPR 195

  Fly   327 HHPQLHHMQHHH-PNNHNNNHPNNHHHNNNN-----NNHHN---------------MGGPHPHHM 370
            ..|.......:. |.::..:..:..:.:.:.     .|:|:               :||......
Mouse   196 GEPASSRRDEYPLPRDYGQSSNDRKYESTSRGYCDYGNYHSREESASKVFSDHAGYLGGRDRDFS 260

  Fly   371 QQMHPMGMNMGMGVNMGMGMGMGMPIHGGGGG-----GGGGGGGGGGGNFHHMAHRGEVF----- 425
            :.   :..|.........|.....|...||..     .....|.||.|. .::::|..::
Mouse   261 EY---LSGNSYRDTYRSYGRFHEAPSARGGNNRYDDYSNSQDGYGGRGE-PYISNRSNIYSSDYE 321

  Fly   426 ------MLPLPICSRFPSQPHPVGNGICHSPNKNSRFRLSRRPQASRTTI 469
                  :||.||...:..:......|  ||| |:..:..||...:|.|.|
Mouse   322 RSGRQEVLPPPIDREYFDREGRQERG--HSP-KDGLYSASRESYSSNTKI 368

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
ssx	NP_569908.1	RRM_SF	93..173	CDD:302621
ssx	NP_569908.1	RRM_SF	179..257	CDD:302621	21/81 (26%)
Rbmy	NP_001159856.1	RRM_SF	7..86	CDD:302621	20/80 (25%)
		RRM	<9..>85	CDD:223796	19/77 (25%)
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	82..226		23/143 (16%)
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	279..358		17/82 (21%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910